Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 PHKG1P2-201ENST00000457537 863 ntBASIC17.7■□□□□ 0.42
TRIM50Q86XT4 ACA64.2-201ENST00000459014 129 ntBASIC17.7■□□□□ 0.42
TRIM50Q86XT4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 AC104596.2-201ENST00000512793 793 ntBASIC17.7■□□□□ 0.42
TRIM50Q86XT4 KRT17P8-201ENST00000540749 863 ntBASIC17.7■□□□□ 0.42
TRIM50Q86XT4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 AL162274.1-201ENST00000617191 1098 ntBASIC17.7■□□□□ 0.42
TRIM50Q86XT4 AL033527.5-201ENST00000641382 801 ntBASIC17.7■□□□□ 0.42
TRIM50Q86XT4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM50Q86XT4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 AL450472.2-201ENST00000603663 1156 ntBASIC17.69■□□□□ 0.42
TRIM50Q86XT4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM50Q86XT4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.68■□□□□ 0.42
TRIM50Q86XT4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 SLED1-202ENST00000512051 380 ntBASIC17.68■□□□□ 0.42
TRIM50Q86XT4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM50Q86XT4 AC008735.3-201ENST00000596646 500 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms