Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 AC011477.6-201ENST00000604980 1927 ntBASIC15.29■□□□□ 0.04
RNF44Q7L0R7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF44Q7L0R7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.28■□□□□ 0.04
RNF44Q7L0R7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 UGT1A2P-201ENST00000454886 866 ntBASIC15.28■□□□□ 0.04
RNF44Q7L0R7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 AC009407.1-201ENST00000568958 598 ntBASIC15.28■□□□□ 0.04
RNF44Q7L0R7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF44Q7L0R7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 REXO1L1P-202ENST00000608646 1974 ntBASIC15.27■□□□□ 0.04
RNF44Q7L0R7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 CDC14C-201ENST00000428251 1719 ntBASIC15.27■□□□□ 0.04
RNF44Q7L0R7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.27■□□□□ 0.04
RNF44Q7L0R7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF44Q7L0R7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF44Q7L0R7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF44Q7L0R7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF44Q7L0R7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF44Q7L0R7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF44Q7L0R7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF44Q7L0R7 BTBD7P1-201ENST00000447253 1453 ntBASIC15.27■□□□□ 0.03
RNF44Q7L0R7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.27■□□□□ 0.03
RNF44Q7L0R7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
RNF44Q7L0R7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF44Q7L0R7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms