Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF549Q6P9A3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 RBPMS2P1-201ENST00000437762 623 ntBASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 AC026150.2-201ENST00000564693 1156 ntBASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 AC090616.6-203ENST00000579186 1945 ntBASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 AC018529.1-201ENST00000613063 361 ntBASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF549Q6P9A3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 AC211486.1-202ENST00000416371 468 ntBASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 AC211476.1-201ENST00000503899 468 ntBASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 AC092865.5-201ENST00000545435 363 ntBASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 AC105021.1-202ENST00000570572 669 ntBASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 AC004835.2-201ENST00000603762 682 ntBASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 AC009093.7-201ENST00000623853 1223 ntBASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ZNF549Q6P9A3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms