Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC23.51■■□□□ 1.35
CDC42BPAQ5VT25 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC23.51■■□□□ 1.35
CDC42BPAQ5VT25 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42BPAQ5VT25 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42BPAQ5VT25 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CDC42BPAQ5VT25 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC23.51■■□□□ 1.35
CDC42BPAQ5VT25 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC23.51■■□□□ 1.35
CDC42BPAQ5VT25 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CDC42BPAQ5VT25 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42BPAQ5VT25 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CDC42BPAQ5VT25 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42BPAQ5VT25 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDC42BPAQ5VT25 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CDC42BPAQ5VT25 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC23.51■■□□□ 1.35
CDC42BPAQ5VT25 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 FXNP2-201ENST00000411625 547 ntBASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 AC004066.1-201ENST00000502488 802 ntBASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 SAMD11P1-201ENST00000571429 661 ntBASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 RN7SL574P-201ENST00000581512 297 ntBASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 NKG7-204ENST00000595217 816 ntTSL 2 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 AP001505.2-201ENST00000616815 443 ntBASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 SMS-201ENST00000379404 1174 ntTSL 3 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 HLA-K-203ENST00000430151 1046 ntBASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 NKAIN1P1-201ENST00000435754 582 ntBASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 COG4-212ENST00000564653 590 ntTSL 5 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC23.5■■□□□ 1.35
CDC42BPAQ5VT25 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 AC007787.1-201ENST00000588095 1583 ntBASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 AL645937.2-201ENST00000396808 931 ntBASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 PFN2-205ENST00000461868 613 ntTSL 2 BASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDC42BPAQ5VT25 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 AC106820.2-201ENST00000563775 3264 ntBASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 UPF3AP2-201ENST00000457924 1132 ntBASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 AP001002.3-201ENST00000623482 206 ntBASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC23.48■■□□□ 1.35
CDC42BPAQ5VT25 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 NUS1P3-201ENST00000423502 862 ntBASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 IMP3P2-201ENST00000489760 475 ntBASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 AC016629.1-201ENST00000596579 586 ntBASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 AC004466.1-201ENST00000599515 1080 ntBASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC23.47■■□□□ 1.35
CDC42BPAQ5VT25 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms