Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA8Q53HL2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA8Q53HL2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA8Q53HL2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDCA8Q53HL2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CDCA8Q53HL2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CDCA8Q53HL2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 CU639417.3-201ENST00000624240 1404 ntBASIC21.81■■□□□ 1.08
CDCA8Q53HL2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 AP006294.1-201ENST00000415407 339 ntBASIC21.81■■□□□ 1.08
CDCA8Q53HL2 FAM86LP-201ENST00000478302 853 ntBASIC21.81■■□□□ 1.08
CDCA8Q53HL2 ELK1P1-201ENST00000485699 580 ntBASIC21.81■■□□□ 1.08
CDCA8Q53HL2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDCA8Q53HL2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 AL442647.2-201ENST00000429864 857 ntBASIC21.8■■□□□ 1.08
CDCA8Q53HL2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 RPL13AP25-201ENST00000484130 612 ntBASIC21.8■■□□□ 1.08
CDCA8Q53HL2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 AC092552.1-201ENST00000547243 906 ntBASIC21.8■■□□□ 1.08
CDCA8Q53HL2 AC015910.1-201ENST00000579400 975 ntBASIC21.8■■□□□ 1.08
CDCA8Q53HL2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC21.8■■□□□ 1.08
CDCA8Q53HL2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 AC098850.1-201ENST00000419919 790 ntBASIC21.79■■□□□ 1.08
CDCA8Q53HL2 NME2P1-201ENST00000426182 414 ntBASIC21.79■■□□□ 1.08
CDCA8Q53HL2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 MIR8072-201ENST00000614241 80 ntBASIC21.79■■□□□ 1.08
CDCA8Q53HL2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDCA8Q53HL2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC21.78■■□□□ 1.08
CDCA8Q53HL2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms