Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNRPFP62306 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNRPFP62306 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNRPFP62306 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.23■□□□□ 0.35
SNRPFP62306 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.23■□□□□ 0.35
SNRPFP62306 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNRPFP62306 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNRPFP62306 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.23■□□□□ 0.35
SNRPFP62306 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.23■□□□□ 0.35
SNRPFP62306 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNRPFP62306 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.23■□□□□ 0.35
SNRPFP62306 AC092337.1-201ENST00000568699 1129 ntBASIC17.23■□□□□ 0.35
SNRPFP62306 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.23■□□□□ 0.35
SNRPFP62306 AC106028.4-201ENST00000614509 607 ntBASIC17.23■□□□□ 0.35
SNRPFP62306 CICP13-201ENST00000422015 2789 ntBASIC17.23■□□□□ 0.35
SNRPFP62306 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SNRPFP62306 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNRPFP62306 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNRPFP62306 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNRPFP62306 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNRPFP62306 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNRPFP62306 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.23■□□□□ 0.35
SNRPFP62306 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.23■□□□□ 0.35
SNRPFP62306 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.22■□□□□ 0.35
SNRPFP62306 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.22■□□□□ 0.35
SNRPFP62306 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.22■□□□□ 0.35
SNRPFP62306 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SNRPFP62306 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SNRPFP62306 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.22■□□□□ 0.35
SNRPFP62306 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SNRPFP62306 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SNRPFP62306 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
SNRPFP62306 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 AL133267.1-201ENST00000398220 340 ntBASIC17.22■□□□□ 0.35
SNRPFP62306 RPL5P21-201ENST00000404620 815 ntBASIC17.22■□□□□ 0.35
SNRPFP62306 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.22■□□□□ 0.35
SNRPFP62306 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.22■□□□□ 0.35
SNRPFP62306 CYMP-203ENST00000474680 1263 ntBASIC17.22■□□□□ 0.35
SNRPFP62306 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.22■□□□□ 0.35
SNRPFP62306 RNA5SP421-201ENST00000516864 134 ntBASIC17.22■□□□□ 0.35
SNRPFP62306 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.22■□□□□ 0.35
SNRPFP62306 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SNRPFP62306 AC044860.1-202ENST00000559481 777 ntBASIC17.22■□□□□ 0.35
SNRPFP62306 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SNRPFP62306 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.22■□□□□ 0.35
SNRPFP62306 AC009407.1-201ENST00000568958 598 ntBASIC17.22■□□□□ 0.35
SNRPFP62306 AL390955.2-201ENST00000603032 514 ntBASIC17.22■□□□□ 0.35
SNRPFP62306 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.22■□□□□ 0.35
SNRPFP62306 AL109936.8-201ENST00000641772 604 ntBASIC17.22■□□□□ 0.35
SNRPFP62306 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.22■□□□□ 0.35
SNRPFP62306 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SNRPFP62306 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.22■□□□□ 0.35
SNRPFP62306 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.22■□□□□ 0.35
SNRPFP62306 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNRPFP62306 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SNRPFP62306 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNRPFP62306 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.21■□□□□ 0.35
SNRPFP62306 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.21■□□□□ 0.35
SNRPFP62306 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.21■□□□□ 0.35
SNRPFP62306 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNRPFP62306 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNRPFP62306 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNRPFP62306 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
SNRPFP62306 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNRPFP62306 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNRPFP62306 AC087481.3-201ENST00000602886 1894 ntBASIC17.21■□□□□ 0.35
SNRPFP62306 AC022144.1-201ENST00000602255 1580 ntBASIC17.21■□□□□ 0.35
SNRPFP62306 AC138969.3-201ENST00000546612 1459 ntBASIC17.21■□□□□ 0.35
SNRPFP62306 AC138932.2-201ENST00000548268 1459 ntBASIC17.21■□□□□ 0.35
SNRPFP62306 AC126755.4-201ENST00000549796 1459 ntBASIC17.21■□□□□ 0.35
SNRPFP62306 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.21■□□□□ 0.35
SNRPFP62306 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SNRPFP62306 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.21■□□□□ 0.35
SNRPFP62306 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.21■□□□□ 0.35
SNRPFP62306 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNRPFP62306 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.21■□□□□ 0.35
SNRPFP62306 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.21■□□□□ 0.35
SNRPFP62306 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.21■□□□□ 0.35
SNRPFP62306 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.21■□□□□ 0.35
SNRPFP62306 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNRPFP62306 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms