Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 EIF5AP2-201ENST00000585668 1047 ntBASIC17.43■□□□□ 0.38
BRCA2P51587 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
BRCA2P51587 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BRCA2P51587 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.43■□□□□ 0.38
BRCA2P51587 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BRCA2P51587 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRCA2P51587 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRCA2P51587 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
BRCA2P51587 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
BRCA2P51587 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRCA2P51587 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
BRCA2P51587 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRCA2P51587 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.43■□□□□ 0.38
BRCA2P51587 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.43■□□□□ 0.38
BRCA2P51587 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BRCA2P51587 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.43■□□□□ 0.38
BRCA2P51587 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BRCA2P51587 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRCA2P51587 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
BRCA2P51587 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.42■□□□□ 0.38
BRCA2P51587 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BRCA2P51587 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BRCA2P51587 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
BRCA2P51587 AC013355.1-201ENST00000562625 723 ntBASIC17.42■□□□□ 0.38
BRCA2P51587 PPY2P-201ENST00000582808 702 ntBASIC17.42■□□□□ 0.38
BRCA2P51587 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BRCA2P51587 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.42■□□□□ 0.38
BRCA2P51587 AC148477.9-201ENST00000623974 539 ntBASIC17.42■□□□□ 0.38
BRCA2P51587 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.42■□□□□ 0.38
BRCA2P51587 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.42■□□□□ 0.38
BRCA2P51587 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRCA2P51587 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.42■□□□□ 0.38
BRCA2P51587 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRCA2P51587 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.42■□□□□ 0.38
BRCA2P51587 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
BRCA2P51587 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.42■□□□□ 0.38
BRCA2P51587 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.42■□□□□ 0.38
BRCA2P51587 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
BRCA2P51587 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
BRCA2P51587 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
BRCA2P51587 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRCA2P51587 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.42■□□□□ 0.38
BRCA2P51587 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
BRCA2P51587 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.42■□□□□ 0.38
BRCA2P51587 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRCA2P51587 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
BRCA2P51587 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRCA2P51587 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.42■□□□□ 0.38
BRCA2P51587 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCA2P51587 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BRCA2P51587 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
BRCA2P51587 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC17.41■□□□□ 0.38
BRCA2P51587 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.41■□□□□ 0.38
BRCA2P51587 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.41■□□□□ 0.38
BRCA2P51587 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.41■□□□□ 0.38
BRCA2P51587 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCA2P51587 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BRCA2P51587 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.41■□□□□ 0.38
BRCA2P51587 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCA2P51587 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCA2P51587 GAPDHP40-201ENST00000505218 1006 ntBASIC17.41■□□□□ 0.38
BRCA2P51587 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.41■□□□□ 0.38
BRCA2P51587 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.41■□□□□ 0.38
BRCA2P51587 AC132192.2-201ENST00000596206 1147 ntBASIC17.41■□□□□ 0.38
BRCA2P51587 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17.41■□□□□ 0.38
BRCA2P51587 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC17.41■□□□□ 0.38
BRCA2P51587 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.41■□□□□ 0.38
BRCA2P51587 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BRCA2P51587 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCA2P51587 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.41■□□□□ 0.38
BRCA2P51587 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
BRCA2P51587 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
BRCA2P51587 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BRCA2P51587 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.41■□□□□ 0.38
BRCA2P51587 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
BRCA2P51587 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.41■□□□□ 0.38
BRCA2P51587 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BRCA2P51587 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BRCA2P51587 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.41■□□□□ 0.38
BRCA2P51587 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.41■□□□□ 0.38
BRCA2P51587 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.41■□□□□ 0.38
BRCA2P51587 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
BRCA2P51587 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BRCA2P51587 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRCA2P51587 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRCA2P51587 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRCA2P51587 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.4■□□□□ 0.38
BRCA2P51587 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRCA2P51587 HIST2H2BB-201ENST00000449108 381 ntBASIC17.4■□□□□ 0.38
BRCA2P51587 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC17.4■□□□□ 0.38
BRCA2P51587 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.4■□□□□ 0.38
BRCA2P51587 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRCA2P51587 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRCA2P51587 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRCA2P51587 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRCA2P51587 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
BRCA2P51587 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
BRCA2P51587 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.4■□□□□ 0.38
BRCA2P51587 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.4■□□□□ 0.38
BRCA2P51587 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms