Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX1P48742 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX1P48742 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LHX1P48742 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LHX1P48742 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
LHX1P48742 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX1P48742 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.79■□□□□ 0.28
LHX1P48742 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.79■□□□□ 0.28
LHX1P48742 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LHX1P48742 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LHX1P48742 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.79■□□□□ 0.28
LHX1P48742 RN7SL399P-201ENST00000471648 279 ntBASIC16.79■□□□□ 0.28
LHX1P48742 AC104596.2-201ENST00000512793 793 ntBASIC16.79■□□□□ 0.28
LHX1P48742 AC123567.1-201ENST00000548294 1261 ntBASIC16.79■□□□□ 0.28
LHX1P48742 AC005225.4-201ENST00000557330 545 ntBASIC16.79■□□□□ 0.28
LHX1P48742 AL596325.1-201ENST00000563991 1082 ntBASIC16.79■□□□□ 0.28
LHX1P48742 AC036164.1-201ENST00000570544 333 ntBASIC16.79■□□□□ 0.28
LHX1P48742 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.79■□□□□ 0.28
LHX1P48742 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
LHX1P48742 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.79■□□□□ 0.28
LHX1P48742 AC007431.3-201ENST00000623221 587 ntBASIC16.79■□□□□ 0.28
LHX1P48742 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LHX1P48742 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX1P48742 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX1P48742 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX1P48742 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LHX1P48742 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.79■□□□□ 0.28
LHX1P48742 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.79■□□□□ 0.28
LHX1P48742 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX1P48742 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LHX1P48742 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.79■□□□□ 0.28
LHX1P48742 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LHX1P48742 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LHX1P48742 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX1P48742 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX1P48742 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LHX1P48742 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX1P48742 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX1P48742 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.78■□□□□ 0.28
LHX1P48742 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX1P48742 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.78■□□□□ 0.28
LHX1P48742 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.78■□□□□ 0.28
LHX1P48742 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LHX1P48742 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LHX1P48742 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX1P48742 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.78■□□□□ 0.28
LHX1P48742 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX1P48742 AC098614.1-201ENST00000368528 745 ntBASIC16.78■□□□□ 0.28
LHX1P48742 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LHX1P48742 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX1P48742 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.78■□□□□ 0.28
LHX1P48742 MYCLP2-201ENST00000449268 967 ntBASIC16.78■□□□□ 0.28
LHX1P48742 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.78■□□□□ 0.28
LHX1P48742 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.78■□□□□ 0.28
LHX1P48742 AC008494.3-201ENST00000606615 944 ntBASIC16.78■□□□□ 0.28
LHX1P48742 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.78■□□□□ 0.28
LHX1P48742 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.78■□□□□ 0.28
LHX1P48742 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX1P48742 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX1P48742 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX1P48742 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.78■□□□□ 0.28
LHX1P48742 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LHX1P48742 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.78■□□□□ 0.28
LHX1P48742 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LHX1P48742 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LHX1P48742 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LHX1P48742 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LHX1P48742 AC018695.7-201ENST00000624587 2492 ntBASIC16.77■□□□□ 0.28
LHX1P48742 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
LHX1P48742 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
LHX1P48742 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LHX1P48742 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LHX1P48742 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LHX1P48742 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.77■□□□□ 0.28
LHX1P48742 AL391005.1-201ENST00000623953 2435 ntBASIC16.77■□□□□ 0.28
LHX1P48742 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LHX1P48742 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LHX1P48742 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LHX1P48742 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LHX1P48742 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.77■□□□□ 0.28
LHX1P48742 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.77■□□□□ 0.28
LHX1P48742 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.77■□□□□ 0.28
LHX1P48742 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.77■□□□□ 0.28
LHX1P48742 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LHX1P48742 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.77■□□□□ 0.28
LHX1P48742 RN7SL692P-201ENST00000464677 288 ntBASIC16.77■□□□□ 0.28
LHX1P48742 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.77■□□□□ 0.28
LHX1P48742 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LHX1P48742 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.77■□□□□ 0.28
LHX1P48742 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.77■□□□□ 0.28
LHX1P48742 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.77■□□□□ 0.28
LHX1P48742 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.77■□□□□ 0.28
LHX1P48742 AC012645.4-201ENST00000610691 1061 ntBASIC16.77■□□□□ 0.28
LHX1P48742 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.77■□□□□ 0.28
LHX1P48742 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LHX1P48742 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LHX1P48742 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LHX1P48742 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LHX1P48742 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
LHX1P48742 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms