Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.13■□□□□ 0.49
COPB2P35606 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 CICP6-201ENST00000457191 2729 ntBASIC18.13■□□□□ 0.49
COPB2P35606 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
COPB2P35606 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.13■□□□□ 0.49
COPB2P35606 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.13■□□□□ 0.49
COPB2P35606 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.13■□□□□ 0.49
COPB2P35606 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.13■□□□□ 0.49
COPB2P35606 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.13■□□□□ 0.49
COPB2P35606 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.13■□□□□ 0.49
COPB2P35606 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 TDH-203ENST00000531764 1110 ntBASIC18.13■□□□□ 0.49
COPB2P35606 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.13■□□□□ 0.49
COPB2P35606 PTP4A1P2-201ENST00000546033 454 ntBASIC18.13■□□□□ 0.49
COPB2P35606 HNRNPUP1-201ENST00000554987 333 ntBASIC18.13■□□□□ 0.49
COPB2P35606 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.13■□□□□ 0.49
COPB2P35606 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.13■□□□□ 0.49
COPB2P35606 AC009486.1-201ENST00000569860 813 ntBASIC18.13■□□□□ 0.49
COPB2P35606 AC124283.3-201ENST00000570869 594 ntBASIC18.13■□□□□ 0.49
COPB2P35606 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COPB2P35606 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COPB2P35606 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
COPB2P35606 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
COPB2P35606 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.13■□□□□ 0.49
COPB2P35606 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
COPB2P35606 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
COPB2P35606 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COPB2P35606 LINC02199-201ENST00000506655 2702 ntBASIC18.12■□□□□ 0.49
COPB2P35606 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
COPB2P35606 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.12■□□□□ 0.49
COPB2P35606 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 AC005229.1-201ENST00000392885 409 ntBASIC18.12■□□□□ 0.49
COPB2P35606 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
COPB2P35606 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.12■□□□□ 0.49
COPB2P35606 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.12■□□□□ 0.49
COPB2P35606 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.12■□□□□ 0.49
COPB2P35606 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.12■□□□□ 0.49
COPB2P35606 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.12■□□□□ 0.49
COPB2P35606 MIR4259-201ENST00000584466 101 ntBASIC18.12■□□□□ 0.49
COPB2P35606 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.12■□□□□ 0.49
COPB2P35606 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.12■□□□□ 0.49
COPB2P35606 AL049840.4-201ENST00000602422 811 ntBASIC18.12■□□□□ 0.49
COPB2P35606 AC000095.1-201ENST00000603208 874 ntBASIC18.12■□□□□ 0.49
COPB2P35606 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.12■□□□□ 0.49
COPB2P35606 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
COPB2P35606 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPB2P35606 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.11■□□□□ 0.49
COPB2P35606 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPB2P35606 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPB2P35606 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
COPB2P35606 AL662844.4-201ENST00000606367 2838 ntBASIC18.11■□□□□ 0.49
COPB2P35606 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPB2P35606 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COPB2P35606 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.11■□□□□ 0.49
COPB2P35606 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.11■□□□□ 0.49
COPB2P35606 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.11■□□□□ 0.49
COPB2P35606 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
COPB2P35606 CROCCP4-201ENST00000457096 498 ntBASIC18.11■□□□□ 0.49
COPB2P35606 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPB2P35606 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.11■□□□□ 0.49
COPB2P35606 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.11■□□□□ 0.49
COPB2P35606 SNX29P1-201ENST00000548357 1007 ntBASIC18.11■□□□□ 0.49
COPB2P35606 AC120045.2-201ENST00000567334 178 ntBASIC18.11■□□□□ 0.49
COPB2P35606 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COPB2P35606 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.11■□□□□ 0.49
COPB2P35606 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.11■□□□□ 0.49
COPB2P35606 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COPB2P35606 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
COPB2P35606 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms