Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC100850.1-201ENST00000506768 649 ntBASIC18.69■□□□□ 0.58
COL4A5P29400 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.69■□□□□ 0.58
COL4A5P29400 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.69■□□□□ 0.58
COL4A5P29400 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.69■□□□□ 0.58
COL4A5P29400 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COL4A5P29400 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL4A5P29400 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL4A5P29400 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL4A5P29400 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
COL4A5P29400 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL4A5P29400 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL4A5P29400 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.68■□□□□ 0.58
COL4A5P29400 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.68■□□□□ 0.58
COL4A5P29400 KRT8P14-201ENST00000414254 1442 ntBASIC18.68■□□□□ 0.58
COL4A5P29400 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL4A5P29400 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL4A5P29400 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL4A5P29400 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL4A5P29400 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL4A5P29400 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.68■□□□□ 0.58
COL4A5P29400 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.68■□□□□ 0.58
COL4A5P29400 AC013355.1-201ENST00000562625 723 ntBASIC18.68■□□□□ 0.58
COL4A5P29400 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL4A5P29400 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL4A5P29400 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL4A5P29400 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.68■□□□□ 0.58
COL4A5P29400 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.68■□□□□ 0.58
COL4A5P29400 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.68■□□□□ 0.58
COL4A5P29400 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL4A5P29400 AC011676.5-201ENST00000624864 2660 ntBASIC18.67■□□□□ 0.58
COL4A5P29400 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL4A5P29400 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL4A5P29400 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.67■□□□□ 0.58
COL4A5P29400 CHMP1AP1-201ENST00000445563 662 ntBASIC18.67■□□□□ 0.58
COL4A5P29400 AC114812.1-204ENST00000449669 728 ntBASIC18.67■□□□□ 0.58
COL4A5P29400 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.67■□□□□ 0.58
COL4A5P29400 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.67■□□□□ 0.58
COL4A5P29400 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL4A5P29400 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.67■□□□□ 0.58
COL4A5P29400 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.67■□□□□ 0.58
COL4A5P29400 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.67■□□□□ 0.58
COL4A5P29400 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL4A5P29400 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL4A5P29400 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL4A5P29400 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL4A5P29400 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL4A5P29400 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL4A5P29400 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL4A5P29400 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL4A5P29400 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
COL4A5P29400 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL4A5P29400 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL4A5P29400 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.67■□□□□ 0.58
COL4A5P29400 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL4A5P29400 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.67■□□□□ 0.58
COL4A5P29400 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL4A5P29400 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.67■□□□□ 0.58
COL4A5P29400 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.66■□□□□ 0.58
COL4A5P29400 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL4A5P29400 FTLP1-201ENST00000449155 526 ntBASIC18.66■□□□□ 0.58
COL4A5P29400 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL4A5P29400 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.66■□□□□ 0.58
COL4A5P29400 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.66■□□□□ 0.58
COL4A5P29400 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.66■□□□□ 0.58
COL4A5P29400 AC026740.1-201ENST00000607068 791 ntBASIC18.66■□□□□ 0.58
COL4A5P29400 AC091544.8-201ENST00000619490 361 ntBASIC18.66■□□□□ 0.58
COL4A5P29400 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.66■□□□□ 0.58
COL4A5P29400 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.66■□□□□ 0.58
COL4A5P29400 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL4A5P29400 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL4A5P29400 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COL4A5P29400 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
COL4A5P29400 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
COL4A5P29400 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL4A5P29400 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.66■□□□□ 0.58
COL4A5P29400 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL4A5P29400 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.66■□□□□ 0.58
COL4A5P29400 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL4A5P29400 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
COL4A5P29400 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.66■□□□□ 0.58
COL4A5P29400 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.66■□□□□ 0.58
COL4A5P29400 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC18.66■□□□□ 0.58
COL4A5P29400 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.66■□□□□ 0.58
COL4A5P29400 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.66■□□□□ 0.58
COL4A5P29400 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL4A5P29400 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
COL4A5P29400 ZACNP1-201ENST00000612259 710 ntBASIC18.66■□□□□ 0.58
COL4A5P29400 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL4A5P29400 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL4A5P29400 AC011477.6-201ENST00000604980 1927 ntBASIC18.65■□□□□ 0.58
COL4A5P29400 KRT8P4-201ENST00000509735 1454 ntBASIC18.65■□□□□ 0.58
COL4A5P29400 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL4A5P29400 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COL4A5P29400 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL4A5P29400 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL4A5P29400 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
COL4A5P29400 AL158070.2-201ENST00000623713 1621 ntBASIC18.65■□□□□ 0.58
COL4A5P29400 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.65■□□□□ 0.58
COL4A5P29400 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
COL4A5P29400 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms