Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL11A1P12107 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL11A1P12107 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.74■□□□□ 0.43
COL11A1P12107 AC084364.1-201ENST00000551967 1556 ntBASIC17.74■□□□□ 0.43
COL11A1P12107 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
COL11A1P12107 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.73■□□□□ 0.43
COL11A1P12107 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
COL11A1P12107 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
COL11A1P12107 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.73■□□□□ 0.43
COL11A1P12107 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.73■□□□□ 0.43
COL11A1P12107 AC104306.2-201ENST00000451877 341 ntBASIC17.73■□□□□ 0.43
COL11A1P12107 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.73■□□□□ 0.43
COL11A1P12107 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.73■□□□□ 0.43
COL11A1P12107 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
COL11A1P12107 AC106820.3-201ENST00000561653 397 ntBASIC17.73■□□□□ 0.43
COL11A1P12107 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.73■□□□□ 0.43
COL11A1P12107 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.73■□□□□ 0.43
COL11A1P12107 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.73■□□□□ 0.43
COL11A1P12107 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.73■□□□□ 0.43
COL11A1P12107 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL11A1P12107 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
COL11A1P12107 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.73■□□□□ 0.43
COL11A1P12107 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.73■□□□□ 0.43
COL11A1P12107 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL11A1P12107 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.72■□□□□ 0.43
COL11A1P12107 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.72■□□□□ 0.43
COL11A1P12107 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.72■□□□□ 0.43
COL11A1P12107 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.72■□□□□ 0.43
COL11A1P12107 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.72■□□□□ 0.43
COL11A1P12107 AL391280.1-201ENST00000506969 1062 ntBASIC17.72■□□□□ 0.43
COL11A1P12107 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.72■□□□□ 0.43
COL11A1P12107 BX539320.1-201ENST00000623759 877 ntBASIC17.72■□□□□ 0.43
COL11A1P12107 AC008687.7-202ENST00000637404 953 ntBASIC17.72■□□□□ 0.43
COL11A1P12107 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 AL133338.1-201ENST00000565695 1517 ntBASIC17.72■□□□□ 0.43
COL11A1P12107 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 KRT8P14-201ENST00000414254 1442 ntBASIC17.72■□□□□ 0.43
COL11A1P12107 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.72■□□□□ 0.43
COL11A1P12107 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 FAM197Y7-201ENST00000432892 766 ntBASIC17.72■□□□□ 0.43
COL11A1P12107 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.72■□□□□ 0.43
COL11A1P12107 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 AC004066.1-201ENST00000502488 802 ntBASIC17.72■□□□□ 0.43
COL11A1P12107 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.72■□□□□ 0.43
COL11A1P12107 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.72■□□□□ 0.43
COL11A1P12107 AC025181.2-201ENST00000606994 802 ntBASIC17.72■□□□□ 0.43
COL11A1P12107 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL11A1P12107 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL11A1P12107 AL138799.1-201ENST00000448213 1675 ntBASIC17.71■□□□□ 0.43
COL11A1P12107 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.71■□□□□ 0.43
COL11A1P12107 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.71■□□□□ 0.43
COL11A1P12107 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL11A1P12107 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL11A1P12107 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
COL11A1P12107 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.71■□□□□ 0.43
COL11A1P12107 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL11A1P12107 AC020763.4-201ENST00000623414 4170 ntBASIC17.71■□□□□ 0.43
COL11A1P12107 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL11A1P12107 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.71■□□□□ 0.43
COL11A1P12107 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL11A1P12107 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.71■□□□□ 0.43
COL11A1P12107 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.71■□□□□ 0.43
COL11A1P12107 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.71■□□□□ 0.43
COL11A1P12107 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.71■□□□□ 0.43
COL11A1P12107 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL11A1P12107 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.71■□□□□ 0.43
COL11A1P12107 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
COL11A1P12107 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL11A1P12107 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.71■□□□□ 0.43
COL11A1P12107 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL11A1P12107 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL11A1P12107 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms