Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.38■□□□□ 0.21
TOP3BO95985 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.38■□□□□ 0.21
TOP3BO95985 MIR4453-201ENST00000584019 89 ntBASIC16.38■□□□□ 0.21
TOP3BO95985 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TOP3BO95985 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.38■□□□□ 0.21
TOP3BO95985 AC069224.1-201ENST00000566372 1715 ntBASIC16.38■□□□□ 0.21
TOP3BO95985 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TOP3BO95985 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TOP3BO95985 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TOP3BO95985 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TOP3BO95985 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.38■□□□□ 0.21
TOP3BO95985 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TOP3BO95985 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TOP3BO95985 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TOP3BO95985 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.37■□□□□ 0.21
TOP3BO95985 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TOP3BO95985 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TOP3BO95985 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TOP3BO95985 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TOP3BO95985 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.37■□□□□ 0.21
TOP3BO95985 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TOP3BO95985 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TOP3BO95985 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.37■□□□□ 0.21
TOP3BO95985 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.37■□□□□ 0.21
TOP3BO95985 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.37■□□□□ 0.21
TOP3BO95985 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.37■□□□□ 0.21
TOP3BO95985 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.37■□□□□ 0.21
TOP3BO95985 AL590560.3-201ENST00000623350 461 ntBASIC16.37■□□□□ 0.21
TOP3BO95985 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.37■□□□□ 0.21
TOP3BO95985 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.37■□□□□ 0.21
TOP3BO95985 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TOP3BO95985 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.37■□□□□ 0.21
TOP3BO95985 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.37■□□□□ 0.21
TOP3BO95985 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TOP3BO95985 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TOP3BO95985 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TOP3BO95985 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TOP3BO95985 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.36■□□□□ 0.21
TOP3BO95985 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.36■□□□□ 0.21
TOP3BO95985 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.36■□□□□ 0.21
TOP3BO95985 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TOP3BO95985 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TOP3BO95985 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.36■□□□□ 0.21
TOP3BO95985 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.36■□□□□ 0.21
TOP3BO95985 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TOP3BO95985 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TOP3BO95985 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TOP3BO95985 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.36■□□□□ 0.21
TOP3BO95985 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.36■□□□□ 0.21
TOP3BO95985 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.36■□□□□ 0.21
TOP3BO95985 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.36■□□□□ 0.21
TOP3BO95985 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.36■□□□□ 0.21
TOP3BO95985 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TOP3BO95985 ALG1L8P-201ENST00000533887 760 ntBASIC16.36■□□□□ 0.21
TOP3BO95985 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.36■□□□□ 0.21
TOP3BO95985 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TOP3BO95985 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.36■□□□□ 0.21
TOP3BO95985 AC017083.2-201ENST00000608069 979 ntBASIC16.36■□□□□ 0.21
TOP3BO95985 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.36■□□□□ 0.21
TOP3BO95985 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.36■□□□□ 0.21
TOP3BO95985 IGHV3-72-202ENST00000621503 303 ntBASIC16.36■□□□□ 0.21
TOP3BO95985 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TOP3BO95985 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TOP3BO95985 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.36■□□□□ 0.21
TOP3BO95985 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TOP3BO95985 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TOP3BO95985 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TOP3BO95985 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.36■□□□□ 0.21
TOP3BO95985 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TOP3BO95985 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TOP3BO95985 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TOP3BO95985 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.36■□□□□ 0.21
TOP3BO95985 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TOP3BO95985 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.35■□□□□ 0.21
TOP3BO95985 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TOP3BO95985 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.35■□□□□ 0.21
TOP3BO95985 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.35■□□□□ 0.21
TOP3BO95985 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TOP3BO95985 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TOP3BO95985 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.35■□□□□ 0.21
TOP3BO95985 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms