Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.47□□□□□ -0.57
PAX4O43316 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
PAX4O43316 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.47□□□□□ -0.57
PAX4O43316 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC11.47□□□□□ -0.57
PAX4O43316 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.47□□□□□ -0.57
PAX4O43316 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.47□□□□□ -0.57
PAX4O43316 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.47□□□□□ -0.57
PAX4O43316 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
PAX4O43316 AL138918.1-201ENST00000568306 659 ntBASIC11.47□□□□□ -0.57
PAX4O43316 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC11.47□□□□□ -0.57
PAX4O43316 AC024267.1-201ENST00000582320 895 ntBASIC11.47□□□□□ -0.57
PAX4O43316 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.47□□□□□ -0.57
PAX4O43316 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.47□□□□□ -0.57
PAX4O43316 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.47□□□□□ -0.57
PAX4O43316 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.47□□□□□ -0.57
PAX4O43316 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
PAX4O43316 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.47□□□□□ -0.57
PAX4O43316 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC11.47□□□□□ -0.57
PAX4O43316 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.47□□□□□ -0.57
PAX4O43316 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
PAX4O43316 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC11.47□□□□□ -0.57
PAX4O43316 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
PAX4O43316 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC11.47□□□□□ -0.57
PAX4O43316 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.47□□□□□ -0.57
PAX4O43316 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
PAX4O43316 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
PAX4O43316 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
PAX4O43316 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 AL596087.1-201ENST00000400979 1969 ntBASIC11.47□□□□□ -0.57
PAX4O43316 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PAX4O43316 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
PAX4O43316 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC11.46□□□□□ -0.57
PAX4O43316 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
PAX4O43316 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
PAX4O43316 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.46□□□□□ -0.57
PAX4O43316 AL589702.1-201ENST00000641229 1509 ntBASIC11.46□□□□□ -0.57
PAX4O43316 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.46□□□□□ -0.57
PAX4O43316 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
PAX4O43316 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.46□□□□□ -0.57
PAX4O43316 LINC00554-201ENST00000564841 3011 ntBASIC11.46□□□□□ -0.57
PAX4O43316 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.57
PAX4O43316 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.46□□□□□ -0.57
PAX4O43316 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.46□□□□□ -0.57
PAX4O43316 MIR1233-2-201ENST00000408138 82 ntBASIC11.46□□□□□ -0.57
PAX4O43316 MIR1233-1-201ENST00000408722 82 ntBASIC11.46□□□□□ -0.57
PAX4O43316 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
PAX4O43316 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.46□□□□□ -0.57
PAX4O43316 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.46□□□□□ -0.57
PAX4O43316 ADH5P3-201ENST00000433842 1137 ntBASIC11.46□□□□□ -0.57
PAX4O43316 SPCS2P4-201ENST00000436160 681 ntBASIC11.46□□□□□ -0.57
PAX4O43316 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.46□□□□□ -0.57
PAX4O43316 YBX1P5-201ENST00000509441 847 ntBASIC11.46□□□□□ -0.57
PAX4O43316 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.46□□□□□ -0.57
PAX4O43316 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC11.46□□□□□ -0.57
PAX4O43316 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.46□□□□□ -0.57
PAX4O43316 AC004223.2-201ENST00000590309 544 ntBASIC11.46□□□□□ -0.57
PAX4O43316 AC004835.2-201ENST00000603762 682 ntBASIC11.46□□□□□ -0.57
PAX4O43316 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 FHL2-212ENST00000607522 759 ntTSL 2 BASIC11.46□□□□□ -0.57
PAX4O43316 AP000240.1-201ENST00000609910 452 ntBASIC11.46□□□□□ -0.57
PAX4O43316 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
PAX4O43316 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
PAX4O43316 AC079781.4-201ENST00000641908 219 ntBASIC11.46□□□□□ -0.57
PAX4O43316 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PAX4O43316 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PAX4O43316 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PAX4O43316 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PAX4O43316 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
PAX4O43316 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PAX4O43316 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms