Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD2O14647 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD2O14647 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC21.56■■□□□ 1.04
CHD2O14647 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CHD2O14647 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.55■■□□□ 1.04
CHD2O14647 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 RPSAP31-201ENST00000416648 895 ntBASIC21.55■■□□□ 1.04
CHD2O14647 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC21.55■■□□□ 1.04
CHD2O14647 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC21.55■■□□□ 1.04
CHD2O14647 AC098935.1-201ENST00000446057 611 ntBASIC21.55■■□□□ 1.04
CHD2O14647 NOC2LP1-201ENST00000450578 752 ntBASIC21.55■■□□□ 1.04
CHD2O14647 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
CHD2O14647 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CHD2O14647 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC21.55■■□□□ 1.04
CHD2O14647 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC21.55■■□□□ 1.04
CHD2O14647 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.55■■□□□ 1.04
CHD2O14647 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.55■■□□□ 1.04
CHD2O14647 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 AC011742.3-201ENST00000439053 820 ntBASIC21.55■■□□□ 1.04
CHD2O14647 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD2O14647 EID1-202ENST00000560490 584 ntTSL 3 BASIC21.55■■□□□ 1.04
CHD2O14647 CENPX-208ENST00000584347 799 ntTSL 2 BASIC21.55■■□□□ 1.04
CHD2O14647 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC21.55■■□□□ 1.04
CHD2O14647 AC090164.2-201ENST00000611487 516 ntBASIC21.55■■□□□ 1.04
CHD2O14647 AL603764.1-201ENST00000636452 321 ntBASIC21.55■■□□□ 1.04
CHD2O14647 HLA-C-210ENST00000640219 976 ntBASIC21.55■■□□□ 1.04
CHD2O14647 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHD2O14647 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC21.54■■□□□ 1.04
CHD2O14647 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHD2O14647 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CHD2O14647 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHD2O14647 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHD2O14647 AC106886.4-201ENST00000623557 2502 ntBASIC21.54■■□□□ 1.04
CHD2O14647 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC21.54■■□□□ 1.04
CHD2O14647 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CHD2O14647 CLUHP2-201ENST00000426660 1303 ntBASIC21.54■■□□□ 1.04
CHD2O14647 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CHD2O14647 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHD2O14647 NPPA-201ENST00000376476 728 ntTSL 3 BASIC21.54■■□□□ 1.04
CHD2O14647 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC21.54■■□□□ 1.04
CHD2O14647 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC21.54■■□□□ 1.04
CHD2O14647 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHD2O14647 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC21.54■■□□□ 1.04
CHD2O14647 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHD2O14647 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHD2O14647 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHD2O14647 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHD2O14647 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.53■■□□□ 1.04
CHD2O14647 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD2O14647 AC006449.6-201ENST00000612330 2296 ntBASIC21.53■■□□□ 1.04
CHD2O14647 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHD2O14647 KRT8P29-201ENST00000420409 1371 ntBASIC21.53■■□□□ 1.04
CHD2O14647 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD2O14647 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD2O14647 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD2O14647 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CHD2O14647 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC21.53■■□□□ 1.04
CHD2O14647 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHD2O14647 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC21.53■■□□□ 1.04
CHD2O14647 AC019193.1-201ENST00000506678 823 ntBASIC21.53■■□□□ 1.04
CHD2O14647 PTK2-225ENST00000520892 571 ntTSL 4 BASIC21.53■■□□□ 1.04
CHD2O14647 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD2O14647 AC005332.8-201ENST00000622750 2735 ntBASIC21.53■■□□□ 1.04
CHD2O14647 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC21.53■■□□□ 1.04
CHD2O14647 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHD2O14647 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHD2O14647 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC21.53■■□□□ 1.04
CHD2O14647 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD2O14647 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD2O14647 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD2O14647 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC21.53■■□□□ 1.04
CHD2O14647 ALOX12P2-203ENST00000570921 1945 ntBASIC21.53■■□□□ 1.04
CHD2O14647 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHD2O14647 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC21.53■■□□□ 1.04
CHD2O14647 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHD2O14647 AC007787.1-201ENST00000588095 1583 ntBASIC21.53■■□□□ 1.04
CHD2O14647 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHD2O14647 RPS15-201ENST00000233609 534 ntTSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms