Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 AC130709.1-201ENST00000484779 1212 ntBASIC19.56■□□□□ 0.72
RGPD3A6NKT7 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RGPD3A6NKT7 AL008718.2-201ENST00000609206 1313 ntBASIC19.55■□□□□ 0.72
RGPD3A6NKT7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 KRT8P21-201ENST00000430398 1491 ntBASIC19.55■□□□□ 0.72
RGPD3A6NKT7 OR2K2-202ENST00000374428 1038 ntBASIC19.55■□□□□ 0.72
RGPD3A6NKT7 PSMD4P1-201ENST00000433951 1109 ntBASIC19.55■□□□□ 0.72
RGPD3A6NKT7 MESTP3-201ENST00000503460 968 ntBASIC19.55■□□□□ 0.72
RGPD3A6NKT7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 AP000356.3-201ENST00000382243 753 ntBASIC19.55■□□□□ 0.72
RGPD3A6NKT7 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC19.55■□□□□ 0.72
RGPD3A6NKT7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 DUX4L47-201ENST00000566374 394 ntBASIC19.55■□□□□ 0.72
RGPD3A6NKT7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 MIR4683-201ENST00000579659 81 ntBASIC19.55■□□□□ 0.72
RGPD3A6NKT7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC19.55■□□□□ 0.72
RGPD3A6NKT7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RGPD3A6NKT7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RGPD3A6NKT7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RGPD3A6NKT7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RGPD3A6NKT7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RGPD3A6NKT7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RGPD3A6NKT7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RGPD3A6NKT7 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC19.54■□□□□ 0.72
RGPD3A6NKT7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.54■□□□□ 0.72
RGPD3A6NKT7 MIR6858-201ENST00000620733 67 ntBASIC19.54■□□□□ 0.72
RGPD3A6NKT7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.54■□□□□ 0.72
RGPD3A6NKT7 AC005618.3-201ENST00000624928 458 ntBASIC19.54■□□□□ 0.72
RGPD3A6NKT7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.54■□□□□ 0.72
RGPD3A6NKT7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.54■□□□□ 0.72
RGPD3A6NKT7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RGPD3A6NKT7 AC078925.2-201ENST00000624013 1973 ntBASIC19.54■□□□□ 0.72
RGPD3A6NKT7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RGPD3A6NKT7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RGPD3A6NKT7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RGPD3A6NKT7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RGPD3A6NKT7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RGPD3A6NKT7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.53■□□□□ 0.72
RGPD3A6NKT7 AC012362.1-201ENST00000434906 739 ntBASIC19.53■□□□□ 0.72
RGPD3A6NKT7 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC19.53■□□□□ 0.72
RGPD3A6NKT7 AC104073.2-201ENST00000453737 312 ntBASIC19.53■□□□□ 0.72
RGPD3A6NKT7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.53■□□□□ 0.72
RGPD3A6NKT7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms