Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AL513210.1-201ENST00000629608 234 ntBASIC18.19■□□□□ 0.5
CLIC4Q9Y696 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.19■□□□□ 0.5
CLIC4Q9Y696 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.19■□□□□ 0.5
CLIC4Q9Y696 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLIC4Q9Y696 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLIC4Q9Y696 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLIC4Q9Y696 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLIC4Q9Y696 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.19■□□□□ 0.5
CLIC4Q9Y696 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.19■□□□□ 0.5
CLIC4Q9Y696 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLIC4Q9Y696 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLIC4Q9Y696 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLIC4Q9Y696 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLIC4Q9Y696 AC091951.1-201ENST00000512854 2465 ntBASIC18.18■□□□□ 0.5
CLIC4Q9Y696 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 AC005237.2-201ENST00000434368 219 ntBASIC18.18■□□□□ 0.5
CLIC4Q9Y696 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 YBX1P5-201ENST00000509441 847 ntBASIC18.18■□□□□ 0.5
CLIC4Q9Y696 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 AC097359.3-201ENST00000603982 1210 ntBASIC18.18■□□□□ 0.5
CLIC4Q9Y696 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLIC4Q9Y696 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 GPS2P2-201ENST00000430745 888 ntBASIC18.17■□□□□ 0.5
CLIC4Q9Y696 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 AC112482.1-201ENST00000492080 688 ntBASIC18.17■□□□□ 0.5
CLIC4Q9Y696 ALG1L8P-201ENST00000533887 760 ntBASIC18.17■□□□□ 0.5
CLIC4Q9Y696 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLIC4Q9Y696 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.16■□□□□ 0.5
CLIC4Q9Y696 HNRNPUP1-201ENST00000554987 333 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms