Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 FAM197Y7-201ENST00000432892 766 ntBASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 Z93015.1-201ENST00000451718 390 ntBASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 AC078819.1-201ENST00000547454 765 ntBASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 AC012085.1-201ENST00000548270 765 ntBASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 AC138951.2-201ENST00000623455 1161 ntBASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HCFC2Q9Y5Z7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 AC104306.2-201ENST00000451877 341 ntBASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 AC015910.1-201ENST00000579400 975 ntBASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HCFC2Q9Y5Z7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 RHOQP1-201ENST00000555758 579 ntBASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
HCFC2Q9Y5Z7 AP005019.2-201ENST00000615104 511 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms