Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 CICP13-201ENST00000422015 2789 ntBASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 ZBTB45P2-201ENST00000452245 1531 ntBASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 ANKRD19P-201ENST00000338192 862 ntBASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 AL512384.1-201ENST00000406683 331 ntBASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 ARSEP1-201ENST00000420443 635 ntBASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 DFFBP1-201ENST00000433250 979 ntBASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 SERBP1P3-201ENST00000459980 809 ntBASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 POU5F1P6-201ENST00000466990 990 ntBASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 AC119751.2-201ENST00000504529 210 ntBASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 HNRNPA1P13-201ENST00000510646 963 ntBASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 IGHV3-71-201ENST00000523324 359 ntBASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 HNRNPUP1-201ENST00000554987 333 ntBASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 AL390728.6-201ENST00000566446 1246 ntBASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 AC026979.3-201ENST00000607315 403 ntBASIC5.4□□□□□ -1.54
KRTAP4-3Q9BYR4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 AL391005.1-201ENST00000623953 2435 ntBASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 PRORSD1P-202ENST00000563365 2154 ntBASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 AC092127.1-201ENST00000567093 3455 ntBASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC5.4□□□□□ -1.55
KRTAP4-3Q9BYR4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms