Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LYSTQ99698 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC10.82□□□□□ -0.68
LYSTQ99698 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LYSTQ99698 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LYSTQ99698 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LYSTQ99698 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LYSTQ99698 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC10.82□□□□□ -0.68
LYSTQ99698 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LYSTQ99698 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LYSTQ99698 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC10.82□□□□□ -0.68
LYSTQ99698 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LYSTQ99698 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC10.82□□□□□ -0.68
LYSTQ99698 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
LYSTQ99698 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
LYSTQ99698 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC10.82□□□□□ -0.68
LYSTQ99698 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC10.82□□□□□ -0.68
LYSTQ99698 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LYSTQ99698 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
LYSTQ99698 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LYSTQ99698 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LYSTQ99698 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC10.82□□□□□ -0.68
LYSTQ99698 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LYSTQ99698 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC10.81□□□□□ -0.68
LYSTQ99698 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LYSTQ99698 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC10.81□□□□□ -0.68
LYSTQ99698 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LYSTQ99698 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LYSTQ99698 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC10.81□□□□□ -0.68
LYSTQ99698 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.81□□□□□ -0.68
LYSTQ99698 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LYSTQ99698 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC10.81□□□□□ -0.68
LYSTQ99698 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC10.81□□□□□ -0.68
LYSTQ99698 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC10.81□□□□□ -0.68
LYSTQ99698 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC10.81□□□□□ -0.68
LYSTQ99698 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LYSTQ99698 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC10.81□□□□□ -0.68
LYSTQ99698 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC10.81□□□□□ -0.68
LYSTQ99698 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC10.81□□□□□ -0.68
LYSTQ99698 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC10.81□□□□□ -0.68
LYSTQ99698 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
LYSTQ99698 IDS-203ENST00000428056 1213 ntTSL 2 BASIC10.81□□□□□ -0.68
LYSTQ99698 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC10.81□□□□□ -0.68
LYSTQ99698 CEP164P1-201ENST00000455142 418 ntBASIC10.81□□□□□ -0.68
LYSTQ99698 AC125604.1-201ENST00000496255 707 ntBASIC10.81□□□□□ -0.68
LYSTQ99698 COX5BP1-201ENST00000507622 393 ntBASIC10.81□□□□□ -0.68
LYSTQ99698 AC126915.1-201ENST00000522847 1038 ntBASIC10.81□□□□□ -0.68
LYSTQ99698 CSH2-206ENST00000560142 749 ntTSL 5 BASIC10.81□□□□□ -0.68
LYSTQ99698 AC000095.1-201ENST00000603208 874 ntBASIC10.81□□□□□ -0.68
LYSTQ99698 AC145423.3-201ENST00000615987 467 ntBASIC10.81□□□□□ -0.68
LYSTQ99698 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LYSTQ99698 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC10.81□□□□□ -0.68
LYSTQ99698 AC099398.1-201ENST00000567919 2776 ntBASIC10.81□□□□□ -0.68
LYSTQ99698 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 AC026471.1-201ENST00000564629 3026 ntBASIC10.8□□□□□ -0.68
LYSTQ99698 AL138709.1-201ENST00000614840 1693 ntBASIC10.8□□□□□ -0.68
LYSTQ99698 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LYSTQ99698 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC10.8□□□□□ -0.68
LYSTQ99698 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LYSTQ99698 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC10.8□□□□□ -0.68
LYSTQ99698 NCK2-206ENST00000522586 490 ntTSL 5 BASIC10.8□□□□□ -0.68
LYSTQ99698 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC10.8□□□□□ -0.68
LYSTQ99698 AC005730.2-201ENST00000564549 1184 ntBASIC10.8□□□□□ -0.68
LYSTQ99698 KLK3-207ENST00000595952 969 ntTSL 3 BASIC10.8□□□□□ -0.68
LYSTQ99698 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LYSTQ99698 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms