Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 POM121L8P-201ENST00000417732 1281 ntBASIC16.12■□□□□ 0.17
NOTCH4Q99466 POM121L9P-203ENST00000441984 1285 ntBASIC16.12■□□□□ 0.17
NOTCH4Q99466 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOTCH4Q99466 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.12■□□□□ 0.17
NOTCH4Q99466 ECM1P1-201ENST00000604092 1279 ntBASIC16.12■□□□□ 0.17
NOTCH4Q99466 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.12■□□□□ 0.17
NOTCH4Q99466 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NOTCH4Q99466 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NOTCH4Q99466 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOTCH4Q99466 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.12■□□□□ 0.17
NOTCH4Q99466 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NOTCH4Q99466 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH4Q99466 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH4Q99466 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH4Q99466 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH4Q99466 AL591846.1-201ENST00000451736 433 ntBASIC16.11■□□□□ 0.17
NOTCH4Q99466 IGHJ2P-201ENST00000454480 60 ntBASIC16.11■□□□□ 0.17
NOTCH4Q99466 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH4Q99466 ACTG1P17-201ENST00000558391 1119 ntBASIC16.11■□□□□ 0.17
NOTCH4Q99466 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 AC006453.4-201ENST00000636949 1252 ntBASIC16.11■□□□□ 0.17
NOTCH4Q99466 AD000864.1-201ENST00000624076 2295 ntBASIC16.11■□□□□ 0.17
NOTCH4Q99466 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH4Q99466 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 KRT8P35-201ENST00000483942 1338 ntBASIC16.11■□□□□ 0.17
NOTCH4Q99466 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.11■□□□□ 0.17
NOTCH4Q99466 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH4Q99466 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH4Q99466 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH4Q99466 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH4Q99466 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH4Q99466 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH4Q99466 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 HSPB1P2-201ENST00000448722 546 ntBASIC16.11■□□□□ 0.17
NOTCH4Q99466 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH4Q99466 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 AP005019.2-201ENST00000615104 511 ntBASIC16.11■□□□□ 0.17
NOTCH4Q99466 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 AC068587.10-201ENST00000641210 219 ntBASIC16.11■□□□□ 0.17
NOTCH4Q99466 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NOTCH4Q99466 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NOTCH4Q99466 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH4Q99466 AL138799.1-201ENST00000448213 1675 ntBASIC16.1■□□□□ 0.17
NOTCH4Q99466 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH4Q99466 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.1■□□□□ 0.17
NOTCH4Q99466 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.1■□□□□ 0.17
NOTCH4Q99466 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.1■□□□□ 0.17
NOTCH4Q99466 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH4Q99466 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.1■□□□□ 0.17
NOTCH4Q99466 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH4Q99466 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH4Q99466 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH4Q99466 BTBD6P1-201ENST00000412176 1267 ntBASIC16.1■□□□□ 0.17
NOTCH4Q99466 KLF2P2-201ENST00000416807 1039 ntBASIC16.1■□□□□ 0.17
NOTCH4Q99466 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH4Q99466 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.1■□□□□ 0.17
NOTCH4Q99466 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
NOTCH4Q99466 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.1■□□□□ 0.17
NOTCH4Q99466 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.1■□□□□ 0.17
NOTCH4Q99466 AL645728.2-202ENST00000641679 227 ntBASIC16.1■□□□□ 0.17
NOTCH4Q99466 PRSS30P-206ENST00000641773 873 ntBASIC16.1■□□□□ 0.17
NOTCH4Q99466 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NOTCH4Q99466 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH4Q99466 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH4Q99466 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH4Q99466 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH4Q99466 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH4Q99466 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH4Q99466 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH4Q99466 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH4Q99466 NKILA-202ENST00000614771 2598 ntBASIC16.1■□□□□ 0.17
NOTCH4Q99466 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.1■□□□□ 0.17
NOTCH4Q99466 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH4Q99466 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH4Q99466 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH4Q99466 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH4Q99466 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.09■□□□□ 0.17
NOTCH4Q99466 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH4Q99466 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH4Q99466 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH4Q99466 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH4Q99466 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NOTCH4Q99466 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NOTCH4Q99466 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms