Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.51■□□□□ 0.23
CDK5RAP1Q96SZ6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 TOMM22P5-201ENST00000416399 439 ntBASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 AC097359.3-201ENST00000603982 1210 ntBASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 LINC01115-203ENST00000606068 577 ntBASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 AF228730.6-201ENST00000641497 218 ntBASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 AC084121.3-201ENST00000641716 218 ntBASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 AC105233.6-201ENST00000642093 218 ntBASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 AL662844.4-201ENST00000606367 2838 ntBASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CDK5RAP1Q96SZ6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 AC138969.3-201ENST00000546612 1459 ntBASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 AC138932.2-201ENST00000548268 1459 ntBASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 AC126755.4-201ENST00000549796 1459 ntBASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 CDC14C-201ENST00000428251 1719 ntBASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 AC023310.3-201ENST00000557027 670 ntBASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 AC100756.1-201ENST00000562736 682 ntBASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 AC138749.3-201ENST00000567691 622 ntBASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 AC036164.1-201ENST00000570544 333 ntBASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 AC093726.1-201ENST00000608064 963 ntBASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 AC116165.1-201ENST00000611806 668 ntBASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 AC025048.6-201ENST00000634326 1161 ntBASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 LINC02447-202ENST00000501888 2146 ntBASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms