Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13□□□□□ -0.33
RAB40CQ96S21 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13□□□□□ -0.33
RAB40CQ96S21 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RAB40CQ96S21 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13□□□□□ -0.33
RAB40CQ96S21 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RAB40CQ96S21 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
RAB40CQ96S21 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 AC092127.1-201ENST00000567093 3455 ntBASIC12.99□□□□□ -0.33
RAB40CQ96S21 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 AC006557.2-201ENST00000592985 1240 ntBASIC12.99□□□□□ -0.33
RAB40CQ96S21 MTDHP4-201ENST00000600287 670 ntBASIC12.99□□□□□ -0.33
RAB40CQ96S21 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 AC232323.1-201ENST00000540724 2099 ntBASIC12.99□□□□□ -0.33
RAB40CQ96S21 AGAP7P-201ENST00000582299 2062 ntBASIC12.99□□□□□ -0.33
RAB40CQ96S21 REXO1L5P-201ENST00000622260 2098 ntBASIC12.99□□□□□ -0.33
RAB40CQ96S21 AGAP14-201ENST00000624701 2060 ntBASIC12.99□□□□□ -0.33
RAB40CQ96S21 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB40CQ96S21 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB40CQ96S21 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 WASH6P-202ENST00000359512 1437 ntBASIC12.98□□□□□ -0.33
RAB40CQ96S21 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 PMS2P4-201ENST00000412466 1052 ntBASIC12.98□□□□□ -0.33
RAB40CQ96S21 ELK2BP-201ENST00000415014 1224 ntBASIC12.98□□□□□ -0.33
RAB40CQ96S21 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 AC093724.1-201ENST00000448659 1027 ntBASIC12.98□□□□□ -0.33
RAB40CQ96S21 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 AC091304.2-201ENST00000564639 760 ntBASIC12.98□□□□□ -0.33
RAB40CQ96S21 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms