Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14□□□□□ -0.17
TMEM54Q969K7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14□□□□□ -0.17
TMEM54Q969K7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TMEM54Q969K7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14□□□□□ -0.17
TMEM54Q969K7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14□□□□□ -0.17
TMEM54Q969K7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14□□□□□ -0.17
TMEM54Q969K7 AC092580.3-201ENST00000430932 139 ntBASIC14□□□□□ -0.17
TMEM54Q969K7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14□□□□□ -0.17
TMEM54Q969K7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14□□□□□ -0.17
TMEM54Q969K7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14□□□□□ -0.17
TMEM54Q969K7 AC097493.3-201ENST00000509725 367 ntBASIC14□□□□□ -0.17
TMEM54Q969K7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14□□□□□ -0.17
TMEM54Q969K7 AC027369.6-201ENST00000525520 931 ntBASIC14□□□□□ -0.17
TMEM54Q969K7 AL512361.1-201ENST00000554200 418 ntBASIC14□□□□□ -0.17
TMEM54Q969K7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14□□□□□ -0.17
TMEM54Q969K7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14□□□□□ -0.17
TMEM54Q969K7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14□□□□□ -0.17
TMEM54Q969K7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14□□□□□ -0.17
TMEM54Q969K7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14□□□□□ -0.17
TMEM54Q969K7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMEM54Q969K7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14□□□□□ -0.17
TMEM54Q969K7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14□□□□□ -0.17
TMEM54Q969K7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TMEM54Q969K7 AL162727.3-201ENST00000635661 2787 ntBASIC14□□□□□ -0.17
TMEM54Q969K7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 AC092127.1-201ENST00000567093 3455 ntBASIC13.99□□□□□ -0.17
TMEM54Q969K7 AC127383.1-201ENST00000444697 1800 ntBASIC13.99□□□□□ -0.17
TMEM54Q969K7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.99□□□□□ -0.17
TMEM54Q969K7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 TREML5P-201ENST00000421694 576 ntBASIC13.99□□□□□ -0.17
TMEM54Q969K7 AL645939.2-201ENST00000427340 991 ntBASIC13.99□□□□□ -0.17
TMEM54Q969K7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 AC025048.3-201ENST00000590609 569 ntBASIC13.99□□□□□ -0.17
TMEM54Q969K7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 AC005702.4-201ENST00000618393 416 ntBASIC13.99□□□□□ -0.17
TMEM54Q969K7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 Z97205.2-201ENST00000564697 1639 ntBASIC13.99□□□□□ -0.17
TMEM54Q969K7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
TMEM54Q969K7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM54Q969K7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 AC022532.1-201ENST00000624563 1728 ntBASIC13.98□□□□□ -0.17
TMEM54Q969K7 TMBIM7P-203ENST00000641617 1718 ntBASIC13.98□□□□□ -0.17
TMEM54Q969K7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms