Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 GPS2P2-201ENST00000430745 888 ntBASIC14.94□□□□□ -0.02
NUP43Q8NFH3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.94□□□□□ -0.02
NUP43Q8NFH3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 AC023141.5-201ENST00000458585 616 ntBASIC14.93□□□□□ -0.02
NUP43Q8NFH3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 AC003101.2-201ENST00000612557 442 ntBASIC14.93□□□□□ -0.02
NUP43Q8NFH3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NUP43Q8NFH3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.92□□□□□ -0.02
NUP43Q8NFH3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 AC254562.1-201ENST00000417586 456 ntBASIC14.92□□□□□ -0.02
NUP43Q8NFH3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 AC026150.2-201ENST00000564693 1156 ntBASIC14.92□□□□□ -0.02
NUP43Q8NFH3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.92□□□□□ -0.02
NUP43Q8NFH3 AC105021.1-202ENST00000570572 669 ntBASIC14.92□□□□□ -0.02
NUP43Q8NFH3 AL450472.2-201ENST00000603663 1156 ntBASIC14.92□□□□□ -0.02
NUP43Q8NFH3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms