Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RC3H1Q5TC82 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 AC148477.4-201ENST00000613430 1793 ntBASIC19.73■□□□□ 0.75
RC3H1Q5TC82 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 AC079178.1-201ENST00000420915 656 ntBASIC19.73■□□□□ 0.75
RC3H1Q5TC82 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 NDUFV2P1-201ENST00000596415 907 ntBASIC19.73■□□□□ 0.75
RC3H1Q5TC82 AC244157.2-201ENST00000616239 1006 ntBASIC19.73■□□□□ 0.75
RC3H1Q5TC82 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
RC3H1Q5TC82 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 KRTAP19-9P-201ENST00000421795 191 ntBASIC19.72■□□□□ 0.75
RC3H1Q5TC82 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RC3H1Q5TC82 AC006449.6-201ENST00000612330 2296 ntBASIC19.72■□□□□ 0.75
RC3H1Q5TC82 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 AC016700.1-201ENST00000429424 312 ntBASIC19.71■□□□□ 0.75
RC3H1Q5TC82 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RC3H1Q5TC82 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms