Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 AL158212.4-201ENST00000624062 1286 ntBASIC19.11■□□□□ 0.65
RFX7Q2KHR2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 AC008894.3-201ENST00000624324 3103 ntBASIC19.11■□□□□ 0.65
RFX7Q2KHR2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RFX7Q2KHR2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 ATP5G2P4-201ENST00000442175 420 ntBASIC19.1■□□□□ 0.65
RFX7Q2KHR2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 GPR53P-205ENST00000457298 1084 ntBASIC19.1■□□□□ 0.65
RFX7Q2KHR2 RN7SL752P-201ENST00000463779 287 ntBASIC19.1■□□□□ 0.65
RFX7Q2KHR2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 AC020658.6-201ENST00000623564 1870 ntBASIC19.1■□□□□ 0.65
RFX7Q2KHR2 AC105917.1-201ENST00000506637 2539 ntBASIC19.1■□□□□ 0.65
RFX7Q2KHR2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RFX7Q2KHR2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 MYCLP2-201ENST00000449268 967 ntBASIC19.09■□□□□ 0.65
RFX7Q2KHR2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 WFDC1-204ENST00000613603 549 ntBASIC19.09■□□□□ 0.65
RFX7Q2KHR2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RFX7Q2KHR2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms