Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.32□□□□□ -0.12
CAV3P56539 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAV3P56539 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.31□□□□□ -0.12
CAV3P56539 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.31□□□□□ -0.12
CAV3P56539 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
CAV3P56539 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
CAV3P56539 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CAV3P56539 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CAV3P56539 AC008677.1-201ENST00000519230 1561 ntBASIC14.31□□□□□ -0.12
CAV3P56539 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CAV3P56539 AC117489.1-201ENST00000625169 3217 ntBASIC14.31□□□□□ -0.12
CAV3P56539 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.31□□□□□ -0.12
CAV3P56539 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CAV3P56539 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.31□□□□□ -0.12
CAV3P56539 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.31□□□□□ -0.12
CAV3P56539 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.31□□□□□ -0.12
CAV3P56539 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.31□□□□□ -0.12
CAV3P56539 RPS2P1-201ENST00000434010 821 ntBASIC14.31□□□□□ -0.12
CAV3P56539 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.31□□□□□ -0.12
CAV3P56539 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.31□□□□□ -0.12
CAV3P56539 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.31□□□□□ -0.12
CAV3P56539 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.31□□□□□ -0.12
CAV3P56539 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.31□□□□□ -0.12
CAV3P56539 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.31□□□□□ -0.12
CAV3P56539 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.31□□□□□ -0.12
CAV3P56539 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.31□□□□□ -0.12
CAV3P56539 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.31□□□□□ -0.12
CAV3P56539 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 LINC00528-201ENST00000600723 2160 ntBASIC14.31□□□□□ -0.12
CAV3P56539 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CAV3P56539 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CAV3P56539 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CAV3P56539 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CAV3P56539 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
CAV3P56539 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.31□□□□□ -0.12
CAV3P56539 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAV3P56539 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.31□□□□□ -0.12
CAV3P56539 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.3□□□□□ -0.12
CAV3P56539 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CAV3P56539 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.3□□□□□ -0.12
CAV3P56539 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.3□□□□□ -0.12
CAV3P56539 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.3□□□□□ -0.12
CAV3P56539 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAV3P56539 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAV3P56539 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAV3P56539 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAV3P56539 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAV3P56539 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAV3P56539 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CAV3P56539 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAV3P56539 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAV3P56539 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAV3P56539 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAV3P56539 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAV3P56539 AC007191.1-201ENST00000623179 2995 ntBASIC14.3□□□□□ -0.12
CAV3P56539 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CAV3P56539 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CAV3P56539 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CAV3P56539 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.3□□□□□ -0.12
CAV3P56539 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.3□□□□□ -0.12
CAV3P56539 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.3□□□□□ -0.12
CAV3P56539 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.3□□□□□ -0.12
CAV3P56539 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CAV3P56539 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.3□□□□□ -0.12
CAV3P56539 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.3□□□□□ -0.12
CAV3P56539 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.3□□□□□ -0.12
CAV3P56539 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.3□□□□□ -0.12
CAV3P56539 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CAV3P56539 SLC25A6P4-201ENST00000586535 553 ntBASIC14.3□□□□□ -0.12
CAV3P56539 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.3□□□□□ -0.12
CAV3P56539 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.3□□□□□ -0.12
CAV3P56539 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CAV3P56539 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CAV3P56539 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.3□□□□□ -0.12
CAV3P56539 REXO1L3P-201ENST00000622202 1288 ntBASIC14.3□□□□□ -0.12
CAV3P56539 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.3□□□□□ -0.12
CAV3P56539 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAV3P56539 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAV3P56539 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms