Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GFRA1P56159 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
GFRA1P56159 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
GFRA1P56159 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.23□□□□□ -0.13
GFRA1P56159 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
GFRA1P56159 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
GFRA1P56159 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.23□□□□□ -0.13
GFRA1P56159 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.23□□□□□ -0.13
GFRA1P56159 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
GFRA1P56159 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.23□□□□□ -0.13
GFRA1P56159 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.23□□□□□ -0.13
GFRA1P56159 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
GFRA1P56159 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.23□□□□□ -0.13
GFRA1P56159 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.23□□□□□ -0.13
GFRA1P56159 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.23□□□□□ -0.13
GFRA1P56159 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.23□□□□□ -0.13
GFRA1P56159 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.23□□□□□ -0.13
GFRA1P56159 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.23□□□□□ -0.13
GFRA1P56159 AL158212.4-201ENST00000624062 1286 ntBASIC14.23□□□□□ -0.13
GFRA1P56159 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.23□□□□□ -0.13
GFRA1P56159 AL358472.5-202ENST00000641448 1267 ntBASIC14.23□□□□□ -0.13
GFRA1P56159 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
GFRA1P56159 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.23□□□□□ -0.13
GFRA1P56159 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GFRA1P56159 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.23□□□□□ -0.13
GFRA1P56159 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
GFRA1P56159 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.23□□□□□ -0.13
GFRA1P56159 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.23□□□□□ -0.13
GFRA1P56159 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GFRA1P56159 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.23□□□□□ -0.13
GFRA1P56159 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFRA1P56159 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFRA1P56159 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFRA1P56159 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
GFRA1P56159 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GFRA1P56159 AC018695.7-201ENST00000624587 2492 ntBASIC14.22□□□□□ -0.13
GFRA1P56159 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFRA1P56159 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GFRA1P56159 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
GFRA1P56159 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFRA1P56159 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.22□□□□□ -0.13
GFRA1P56159 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.22□□□□□ -0.13
GFRA1P56159 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.22□□□□□ -0.13
GFRA1P56159 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.22□□□□□ -0.13
GFRA1P56159 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.22□□□□□ -0.13
GFRA1P56159 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.22□□□□□ -0.13
GFRA1P56159 AC005225.4-201ENST00000557330 545 ntBASIC14.22□□□□□ -0.13
GFRA1P56159 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.22□□□□□ -0.13
GFRA1P56159 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.22□□□□□ -0.13
GFRA1P56159 AC093726.1-201ENST00000608064 963 ntBASIC14.22□□□□□ -0.13
GFRA1P56159 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFRA1P56159 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFRA1P56159 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GFRA1P56159 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFRA1P56159 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
GFRA1P56159 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFRA1P56159 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.22□□□□□ -0.13
GFRA1P56159 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.22□□□□□ -0.13
GFRA1P56159 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GFRA1P56159 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFRA1P56159 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.22□□□□□ -0.13
GFRA1P56159 AL391005.1-201ENST00000623953 2435 ntBASIC14.22□□□□□ -0.13
GFRA1P56159 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
GFRA1P56159 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GFRA1P56159 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GFRA1P56159 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GFRA1P56159 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GFRA1P56159 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GFRA1P56159 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
GFRA1P56159 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GFRA1P56159 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GFRA1P56159 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GFRA1P56159 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.21□□□□□ -0.13
GFRA1P56159 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.21□□□□□ -0.13
GFRA1P56159 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GFRA1P56159 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GFRA1P56159 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GFRA1P56159 AC138969.3-201ENST00000546612 1459 ntBASIC14.21□□□□□ -0.13
GFRA1P56159 AC138932.2-201ENST00000548268 1459 ntBASIC14.21□□□□□ -0.13
GFRA1P56159 AC126755.4-201ENST00000549796 1459 ntBASIC14.21□□□□□ -0.13
GFRA1P56159 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
GFRA1P56159 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GFRA1P56159 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms