Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.69□□□□□ -0.06
CDH11P55287 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH11P55287 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH11P55287 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.69□□□□□ -0.06
CDH11P55287 ACTL9-202ENST00000612068 1252 ntBASIC14.69□□□□□ -0.06
CDH11P55287 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH11P55287 AC091812.2-201ENST00000619081 385 ntBASIC14.69□□□□□ -0.06
CDH11P55287 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH11P55287 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH11P55287 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CDH11P55287 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH11P55287 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH11P55287 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH11P55287 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH11P55287 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.69□□□□□ -0.06
CDH11P55287 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH11P55287 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH11P55287 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH11P55287 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 AC008677.1-201ENST00000519230 1561 ntBASIC14.68□□□□□ -0.06
CDH11P55287 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CDH11P55287 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH11P55287 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH11P55287 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CDH11P55287 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH11P55287 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDH11P55287 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 AC020658.6-201ENST00000623564 1870 ntBASIC14.68□□□□□ -0.06
CDH11P55287 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH11P55287 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH11P55287 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDH11P55287 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH11P55287 AC254562.1-201ENST00000417586 456 ntBASIC14.68□□□□□ -0.06
CDH11P55287 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
CDH11P55287 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH11P55287 CNN2P11-201ENST00000429351 262 ntBASIC14.68□□□□□ -0.06
CDH11P55287 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDH11P55287 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH11P55287 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH11P55287 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CDH11P55287 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
CDH11P55287 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.68□□□□□ -0.06
CDH11P55287 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH11P55287 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH11P55287 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH11P55287 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH11P55287 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH11P55287 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH11P55287 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH11P55287 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH11P55287 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH11P55287 TMBIM7P-203ENST00000641617 1718 ntBASIC14.67□□□□□ -0.06
CDH11P55287 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH11P55287 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDH11P55287 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 ACTG1P14-201ENST00000446382 1122 ntBASIC14.67□□□□□ -0.06
CDH11P55287 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.67□□□□□ -0.06
CDH11P55287 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.67□□□□□ -0.06
CDH11P55287 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CDH11P55287 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CDH11P55287 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH11P55287 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH11P55287 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms