Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.24□□□□□ -0.13
SRP9P49458 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SRP9P49458 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.23□□□□□ -0.13
SRP9P49458 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SRP9P49458 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SRP9P49458 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SRP9P49458 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.23□□□□□ -0.13
SRP9P49458 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
SRP9P49458 AL031731.1-201ENST00000642131 2094 ntBASIC14.23□□□□□ -0.13
SRP9P49458 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SRP9P49458 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SRP9P49458 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SRP9P49458 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.23□□□□□ -0.13
SRP9P49458 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.23□□□□□ -0.13
SRP9P49458 AC074386.1-202ENST00000463561 864 ntBASIC14.23□□□□□ -0.13
SRP9P49458 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.23□□□□□ -0.13
SRP9P49458 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.23□□□□□ -0.13
SRP9P49458 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.23□□□□□ -0.13
SRP9P49458 PDPK2P-202ENST00000562415 1191 ntBASIC14.23□□□□□ -0.13
SRP9P49458 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.23□□□□□ -0.13
SRP9P49458 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.23□□□□□ -0.13
SRP9P49458 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SRP9P49458 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SRP9P49458 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 AL512652.2-201ENST00000625156 1716 ntBASIC14.23□□□□□ -0.13
SRP9P49458 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.23□□□□□ -0.13
SRP9P49458 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.23□□□□□ -0.13
SRP9P49458 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SRP9P49458 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.23□□□□□ -0.13
SRP9P49458 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SRP9P49458 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.22□□□□□ -0.13
SRP9P49458 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
SRP9P49458 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.22□□□□□ -0.13
SRP9P49458 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.22□□□□□ -0.13
SRP9P49458 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.22□□□□□ -0.13
SRP9P49458 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.22□□□□□ -0.13
SRP9P49458 AC023274.1-201ENST00000418278 595 ntBASIC14.22□□□□□ -0.13
SRP9P49458 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.22□□□□□ -0.13
SRP9P49458 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.22□□□□□ -0.13
SRP9P49458 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.22□□□□□ -0.13
SRP9P49458 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.22□□□□□ -0.13
SRP9P49458 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.22□□□□□ -0.13
SRP9P49458 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.22□□□□□ -0.13
SRP9P49458 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.22□□□□□ -0.13
SRP9P49458 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.22□□□□□ -0.13
SRP9P49458 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.22□□□□□ -0.13
SRP9P49458 AC068137.2-201ENST00000605408 478 ntBASIC14.22□□□□□ -0.13
SRP9P49458 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SRP9P49458 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.22□□□□□ -0.13
SRP9P49458 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SRP9P49458 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.22□□□□□ -0.13
SRP9P49458 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.22□□□□□ -0.13
SRP9P49458 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 SNX33P1-201ENST00000592116 1762 ntBASIC14.22□□□□□ -0.13
SRP9P49458 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRP9P49458 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms