Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CX3CR1P49238 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CX3CR1P49238 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CX3CR1P49238 GPX1P2-201ENST00000429271 606 ntBASIC14.08□□□□□ -0.16
CX3CR1P49238 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.08□□□□□ -0.16
CX3CR1P49238 RN7SL589P-201ENST00000481268 310 ntBASIC14.08□□□□□ -0.16
CX3CR1P49238 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.08□□□□□ -0.16
CX3CR1P49238 AC024267.1-201ENST00000582320 895 ntBASIC14.08□□□□□ -0.16
CX3CR1P49238 AC027307.2-201ENST00000591252 911 ntBASIC14.08□□□□□ -0.16
CX3CR1P49238 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.08□□□□□ -0.16
CX3CR1P49238 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CX3CR1P49238 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.08□□□□□ -0.16
CX3CR1P49238 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.08□□□□□ -0.16
CX3CR1P49238 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CX3CR1P49238 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CX3CR1P49238 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CX3CR1P49238 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CX3CR1P49238 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CX3CR1P49238 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.08□□□□□ -0.16
CX3CR1P49238 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CX3CR1P49238 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CX3CR1P49238 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CX3CR1P49238 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CX3CR1P49238 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CX3CR1P49238 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.07□□□□□ -0.16
CX3CR1P49238 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CX3CR1P49238 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.07□□□□□ -0.16
CX3CR1P49238 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CX3CR1P49238 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CX3CR1P49238 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CX3CR1P49238 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CX3CR1P49238 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.07□□□□□ -0.16
CX3CR1P49238 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.07□□□□□ -0.16
CX3CR1P49238 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CX3CR1P49238 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.07□□□□□ -0.16
CX3CR1P49238 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.07□□□□□ -0.16
CX3CR1P49238 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
CX3CR1P49238 FAM86C2P-203ENST00000528684 1004 ntBASIC14.07□□□□□ -0.16
CX3CR1P49238 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.07□□□□□ -0.16
CX3CR1P49238 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.07□□□□□ -0.16
CX3CR1P49238 AC040169.1-201ENST00000565382 521 ntBASIC14.07□□□□□ -0.16
CX3CR1P49238 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.07□□□□□ -0.16
CX3CR1P49238 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CX3CR1P49238 AC008267.7-201ENST00000624570 1194 ntBASIC14.07□□□□□ -0.16
CX3CR1P49238 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.07□□□□□ -0.16
CX3CR1P49238 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CX3CR1P49238 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.07□□□□□ -0.16
CX3CR1P49238 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.07□□□□□ -0.16
CX3CR1P49238 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CX3CR1P49238 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CX3CR1P49238 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.07□□□□□ -0.16
CX3CR1P49238 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.07□□□□□ -0.16
CX3CR1P49238 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CX3CR1P49238 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CX3CR1P49238 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CX3CR1P49238 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CX3CR1P49238 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CX3CR1P49238 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CX3CR1P49238 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.07□□□□□ -0.16
CX3CR1P49238 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.06□□□□□ -0.16
CX3CR1P49238 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.06□□□□□ -0.16
CX3CR1P49238 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CX3CR1P49238 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.06□□□□□ -0.16
CX3CR1P49238 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CX3CR1P49238 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.06□□□□□ -0.16
CX3CR1P49238 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.06□□□□□ -0.16
CX3CR1P49238 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.06□□□□□ -0.16
CX3CR1P49238 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.06□□□□□ -0.16
CX3CR1P49238 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.06□□□□□ -0.16
CX3CR1P49238 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.06□□□□□ -0.16
CX3CR1P49238 AC092902.6-201ENST00000641783 218 ntBASIC14.06□□□□□ -0.16
CX3CR1P49238 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CX3CR1P49238 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CX3CR1P49238 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.06□□□□□ -0.16
CX3CR1P49238 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.06□□□□□ -0.16
CX3CR1P49238 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.06□□□□□ -0.16
CX3CR1P49238 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CX3CR1P49238 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CX3CR1P49238 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms