Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.07■□□□□ 0.32
SSR1P43307 PRYP6-201ENST00000514804 343 ntBASIC17.07■□□□□ 0.32
SSR1P43307 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.07■□□□□ 0.32
SSR1P43307 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.07■□□□□ 0.32
SSR1P43307 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.07■□□□□ 0.32
SSR1P43307 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.07■□□□□ 0.32
SSR1P43307 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SSR1P43307 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.07■□□□□ 0.32
SSR1P43307 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.07■□□□□ 0.32
SSR1P43307 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.07■□□□□ 0.32
SSR1P43307 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SSR1P43307 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.07■□□□□ 0.32
SSR1P43307 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SSR1P43307 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR1P43307 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SSR1P43307 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SSR1P43307 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SSR1P43307 AP005117.1-202ENST00000581724 1908 ntBASIC17.06■□□□□ 0.32
SSR1P43307 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.06■□□□□ 0.32
SSR1P43307 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SSR1P43307 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SSR1P43307 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SSR1P43307 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SSR1P43307 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.06■□□□□ 0.32
SSR1P43307 AL591424.1-201ENST00000442569 1213 ntBASIC17.06■□□□□ 0.32
SSR1P43307 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SSR1P43307 AC112191.1-201ENST00000523689 701 ntBASIC17.06■□□□□ 0.32
SSR1P43307 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.06■□□□□ 0.32
SSR1P43307 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.06■□□□□ 0.32
SSR1P43307 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 AC106730.1-201ENST00000566722 1090 ntBASIC17.06■□□□□ 0.32
SSR1P43307 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.06■□□□□ 0.32
SSR1P43307 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SSR1P43307 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SSR1P43307 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR1P43307 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.06■□□□□ 0.32
SSR1P43307 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SSR1P43307 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.05■□□□□ 0.32
SSR1P43307 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.05■□□□□ 0.32
SSR1P43307 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SSR1P43307 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SSR1P43307 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 HAUS4P1-201ENST00000406739 1145 ntBASIC17.05■□□□□ 0.32
SSR1P43307 AC023274.1-201ENST00000418278 595 ntBASIC17.05■□□□□ 0.32
SSR1P43307 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.05■□□□□ 0.32
SSR1P43307 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.05■□□□□ 0.32
SSR1P43307 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.05■□□□□ 0.32
SSR1P43307 AP002472.1-201ENST00000577490 586 ntBASIC17.05■□□□□ 0.32
SSR1P43307 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.05■□□□□ 0.32
SSR1P43307 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
SSR1P43307 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SSR1P43307 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.05■□□□□ 0.32
SSR1P43307 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR1P43307 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SSR1P43307 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SSR1P43307 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.04■□□□□ 0.32
SSR1P43307 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.04■□□□□ 0.32
SSR1P43307 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSR1P43307 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.04■□□□□ 0.32
SSR1P43307 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms