Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
RFC4P35249 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.82■□□□□ 0.76
RFC4P35249 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
RFC4P35249 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.82■□□□□ 0.76
RFC4P35249 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFC4P35249 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFC4P35249 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFC4P35249 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFC4P35249 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFC4P35249 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RFC4P35249 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFC4P35249 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.82■□□□□ 0.76
RFC4P35249 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.82■□□□□ 0.76
RFC4P35249 AL590640.2-201ENST00000457038 527 ntBASIC19.82■□□□□ 0.76
RFC4P35249 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
RFC4P35249 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.82■□□□□ 0.76
RFC4P35249 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.82■□□□□ 0.76
RFC4P35249 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RFC4P35249 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
RFC4P35249 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RFC4P35249 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RFC4P35249 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RFC4P35249 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFC4P35249 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFC4P35249 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFC4P35249 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.82■□□□□ 0.76
RFC4P35249 AC005332.8-201ENST00000622750 2735 ntBASIC19.82■□□□□ 0.76
RFC4P35249 AC015818.8-201ENST00000587907 1519 ntBASIC19.81■□□□□ 0.76
RFC4P35249 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RFC4P35249 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.81■□□□□ 0.76
RFC4P35249 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.81■□□□□ 0.76
RFC4P35249 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.81■□□□□ 0.76
RFC4P35249 KRT8P35-201ENST00000483942 1338 ntBASIC19.81■□□□□ 0.76
RFC4P35249 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RFC4P35249 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.81■□□□□ 0.76
RFC4P35249 BX284668.4-201ENST00000453917 508 ntBASIC19.81■□□□□ 0.76
RFC4P35249 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.81■□□□□ 0.76
RFC4P35249 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RFC4P35249 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC4P35249 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.81■□□□□ 0.76
RFC4P35249 EEF1DP1-201ENST00000585891 896 ntBASIC19.81■□□□□ 0.76
RFC4P35249 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.81■□□□□ 0.76
RFC4P35249 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.81■□□□□ 0.76
RFC4P35249 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
RFC4P35249 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.81■□□□□ 0.76
RFC4P35249 AC006453.4-201ENST00000636949 1252 ntBASIC19.81■□□□□ 0.76
RFC4P35249 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.81■□□□□ 0.76
RFC4P35249 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC4P35249 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC4P35249 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RFC4P35249 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFC4P35249 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.81■□□□□ 0.76
RFC4P35249 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC4P35249 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC4P35249 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC4P35249 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFC4P35249 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC4P35249 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFC4P35249 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RFC4P35249 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFC4P35249 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFC4P35249 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC4P35249 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC4P35249 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.8■□□□□ 0.76
RFC4P35249 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC4P35249 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
RFC4P35249 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.8■□□□□ 0.76
RFC4P35249 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
RFC4P35249 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.8■□□□□ 0.76
RFC4P35249 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC4P35249 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC4P35249 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC4P35249 AL662890.1-201ENST00000396818 632 ntBASIC19.8■□□□□ 0.76
RFC4P35249 AL133267.1-201ENST00000398220 340 ntBASIC19.8■□□□□ 0.76
RFC4P35249 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RFC4P35249 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.8■□□□□ 0.76
RFC4P35249 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.8■□□□□ 0.76
RFC4P35249 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFC4P35249 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFC4P35249 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFC4P35249 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFC4P35249 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.8■□□□□ 0.76
RFC4P35249 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.8■□□□□ 0.76
RFC4P35249 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RFC4P35249 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.8■□□□□ 0.76
RFC4P35249 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFC4P35249 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC4P35249 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
RFC4P35249 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFC4P35249 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RFC4P35249 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC4P35249 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC4P35249 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.79■□□□□ 0.76
RFC4P35249 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC4P35249 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.79■□□□□ 0.76
RFC4P35249 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RFC4P35249 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFC4P35249 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC4P35249 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFC4P35249 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms