Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFRAP16234 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDGFRAP16234 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.74■□□□□ 0.27
PDGFRAP16234 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.74■□□□□ 0.27
PDGFRAP16234 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.74■□□□□ 0.27
PDGFRAP16234 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PDGFRAP16234 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PDGFRAP16234 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PDGFRAP16234 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
PDGFRAP16234 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.74■□□□□ 0.27
PDGFRAP16234 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.74■□□□□ 0.27
PDGFRAP16234 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.74■□□□□ 0.27
PDGFRAP16234 AC107890.1-201ENST00000422478 521 ntBASIC16.74■□□□□ 0.27
PDGFRAP16234 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.74■□□□□ 0.27
PDGFRAP16234 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.74■□□□□ 0.27
PDGFRAP16234 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.74■□□□□ 0.27
PDGFRAP16234 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.74■□□□□ 0.27
PDGFRAP16234 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.74■□□□□ 0.27
PDGFRAP16234 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.74■□□□□ 0.27
PDGFRAP16234 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.74■□□□□ 0.27
PDGFRAP16234 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.74■□□□□ 0.27
PDGFRAP16234 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PDGFRAP16234 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.74■□□□□ 0.27
PDGFRAP16234 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PDGFRAP16234 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PDGFRAP16234 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 AC046158.3-201ENST00000624947 2558 ntBASIC16.74■□□□□ 0.27
PDGFRAP16234 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDGFRAP16234 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
PDGFRAP16234 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.73■□□□□ 0.27
PDGFRAP16234 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PDGFRAP16234 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PDGFRAP16234 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PDGFRAP16234 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PDGFRAP16234 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PDGFRAP16234 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFRAP16234 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PDGFRAP16234 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PDGFRAP16234 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.73■□□□□ 0.27
PDGFRAP16234 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.73■□□□□ 0.27
PDGFRAP16234 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 MIR770-201ENST00000390219 98 ntBASIC16.73■□□□□ 0.27
PDGFRAP16234 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.73■□□□□ 0.27
PDGFRAP16234 MIR943-201ENST00000401286 94 ntBASIC16.73■□□□□ 0.27
PDGFRAP16234 EEF1DP4-201ENST00000446006 880 ntBASIC16.73■□□□□ 0.27
PDGFRAP16234 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFRAP16234 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.73■□□□□ 0.27
PDGFRAP16234 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFRAP16234 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFRAP16234 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.73■□□□□ 0.27
PDGFRAP16234 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PDGFRAP16234 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PDGFRAP16234 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PDGFRAP16234 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PDGFRAP16234 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFRAP16234 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFRAP16234 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFRAP16234 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PDGFRAP16234 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.73■□□□□ 0.27
PDGFRAP16234 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDGFRAP16234 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.72■□□□□ 0.27
PDGFRAP16234 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFRAP16234 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFRAP16234 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.72■□□□□ 0.27
PDGFRAP16234 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PDGFRAP16234 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.72■□□□□ 0.27
PDGFRAP16234 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDGFRAP16234 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms