Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.47□□□□□ -0.09
FREM3P0C091 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.47□□□□□ -0.09
FREM3P0C091 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
FREM3P0C091 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
FREM3P0C091 SRD5A3P1-201ENST00000603021 949 ntBASIC14.47□□□□□ -0.09
FREM3P0C091 AC004461.2-201ENST00000629517 803 ntBASIC14.47□□□□□ -0.09
FREM3P0C091 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 LINC02447-202ENST00000501888 2146 ntBASIC14.46□□□□□ -0.09
FREM3P0C091 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.46□□□□□ -0.09
FREM3P0C091 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
FREM3P0C091 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 AC134407.2-201ENST00000625089 1978 ntBASIC14.46□□□□□ -0.09
FREM3P0C091 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
FREM3P0C091 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.46□□□□□ -0.09
FREM3P0C091 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
FREM3P0C091 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.46□□□□□ -0.09
FREM3P0C091 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.46□□□□□ -0.09
FREM3P0C091 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.46□□□□□ -0.09
FREM3P0C091 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.46□□□□□ -0.09
FREM3P0C091 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.46□□□□□ -0.09
FREM3P0C091 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.46□□□□□ -0.09
FREM3P0C091 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FREM3P0C091 AC105917.1-201ENST00000506637 2539 ntBASIC14.46□□□□□ -0.1
FREM3P0C091 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.46□□□□□ -0.1
FREM3P0C091 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.1
FREM3P0C091 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
FREM3P0C091 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.46□□□□□ -0.1
FREM3P0C091 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.46□□□□□ -0.1
FREM3P0C091 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FREM3P0C091 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.45□□□□□ -0.1
FREM3P0C091 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.45□□□□□ -0.1
FREM3P0C091 AC114501.2-201ENST00000439631 535 ntBASIC14.45□□□□□ -0.1
FREM3P0C091 INGX-202ENST00000489074 768 ntBASIC14.45□□□□□ -0.1
FREM3P0C091 AP005018.1-201ENST00000525475 301 ntBASIC14.45□□□□□ -0.1
FREM3P0C091 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
FREM3P0C091 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.45□□□□□ -0.1
FREM3P0C091 AC005225.4-201ENST00000557330 545 ntBASIC14.45□□□□□ -0.1
FREM3P0C091 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.45□□□□□ -0.1
FREM3P0C091 AC007431.3-201ENST00000623221 587 ntBASIC14.45□□□□□ -0.1
FREM3P0C091 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.45□□□□□ -0.1
FREM3P0C091 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.45□□□□□ -0.1
FREM3P0C091 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
FREM3P0C091 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
FREM3P0C091 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
FREM3P0C091 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
FREM3P0C091 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.45□□□□□ -0.1
FREM3P0C091 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.45□□□□□ -0.1
FREM3P0C091 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.45□□□□□ -0.1
FREM3P0C091 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.45□□□□□ -0.1
FREM3P0C091 HIST3H2BA-201ENST00000436555 524 ntBASIC14.45□□□□□ -0.1
FREM3P0C091 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.45□□□□□ -0.1
FREM3P0C091 AL512638.1-201ENST00000457493 794 ntBASIC14.45□□□□□ -0.1
FREM3P0C091 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
FREM3P0C091 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.45□□□□□ -0.1
FREM3P0C091 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
FREM3P0C091 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.45□□□□□ -0.1
FREM3P0C091 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.45□□□□□ -0.1
FREM3P0C091 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.45□□□□□ -0.1
FREM3P0C091 MIR6069-201ENST00000620069 79 ntBASIC14.45□□□□□ -0.1
FREM3P0C091 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.45□□□□□ -0.1
FREM3P0C091 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.45□□□□□ -0.1
FREM3P0C091 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FREM3P0C091 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.45□□□□□ -0.1
FREM3P0C091 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms