Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
COL5A2P05997 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.53■□□□□ 0.88
COL5A2P05997 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.53■□□□□ 0.88
COL5A2P05997 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.53■□□□□ 0.88
COL5A2P05997 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.53■□□□□ 0.88
COL5A2P05997 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL5A2P05997 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL5A2P05997 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
COL5A2P05997 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
COL5A2P05997 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL5A2P05997 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL5A2P05997 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC20.53■□□□□ 0.88
COL5A2P05997 HIST2H2BB-201ENST00000449108 381 ntBASIC20.53■□□□□ 0.88
COL5A2P05997 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC20.53■□□□□ 0.88
COL5A2P05997 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL5A2P05997 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL5A2P05997 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC20.53■□□□□ 0.88
COL5A2P05997 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
COL5A2P05997 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL5A2P05997 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
COL5A2P05997 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
COL5A2P05997 AC008132.1-202ENST00000342005 1389 ntBASIC20.53■□□□□ 0.88
COL5A2P05997 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL5A2P05997 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL5A2P05997 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
COL5A2P05997 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
COL5A2P05997 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL5A2P05997 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC20.53■□□□□ 0.88
COL5A2P05997 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC20.53■□□□□ 0.88
COL5A2P05997 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL5A2P05997 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
COL5A2P05997 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL5A2P05997 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
COL5A2P05997 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
COL5A2P05997 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL5A2P05997 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL5A2P05997 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL5A2P05997 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.52■□□□□ 0.88
COL5A2P05997 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.52■□□□□ 0.88
COL5A2P05997 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL5A2P05997 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL5A2P05997 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL5A2P05997 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL5A2P05997 IGF1-203ENST00000392904 761 ntTSL 5 BASIC20.52■□□□□ 0.88
COL5A2P05997 ACTG1P2-201ENST00000415776 1125 ntBASIC20.52■□□□□ 0.88
COL5A2P05997 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC20.52■□□□□ 0.88
COL5A2P05997 ACTG1P11-201ENST00000425411 1125 ntBASIC20.52■□□□□ 0.88
COL5A2P05997 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC20.52■□□□□ 0.88
COL5A2P05997 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC20.52■□□□□ 0.88
COL5A2P05997 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC20.52■□□□□ 0.88
COL5A2P05997 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC20.52■□□□□ 0.88
COL5A2P05997 AC106820.3-201ENST00000561653 397 ntBASIC20.52■□□□□ 0.88
COL5A2P05997 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC20.52■□□□□ 0.88
COL5A2P05997 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC20.52■□□□□ 0.88
COL5A2P05997 AC018635.2-201ENST00000608625 364 ntBASIC20.52■□□□□ 0.88
COL5A2P05997 ZACNP1-201ENST00000612259 710 ntBASIC20.52■□□□□ 0.88
COL5A2P05997 AC079336.7-201ENST00000623428 1078 ntBASIC20.52■□□□□ 0.88
COL5A2P05997 AP001002.3-201ENST00000623482 206 ntBASIC20.52■□□□□ 0.88
COL5A2P05997 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
COL5A2P05997 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
COL5A2P05997 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL5A2P05997 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL5A2P05997 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL5A2P05997 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
COL5A2P05997 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL5A2P05997 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.52■□□□□ 0.88
COL5A2P05997 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.52■□□□□ 0.88
COL5A2P05997 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL5A2P05997 LRRC59-203ENST00000576448 1531 ntBASIC20.52■□□□□ 0.88
COL5A2P05997 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
COL5A2P05997 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
COL5A2P05997 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
COL5A2P05997 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL5A2P05997 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL5A2P05997 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL5A2P05997 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL5A2P05997 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COL5A2P05997 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC20.51■□□□□ 0.87
COL5A2P05997 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
COL5A2P05997 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.51■□□□□ 0.87
COL5A2P05997 AC007274.2-201ENST00000421675 662 ntBASIC20.51■□□□□ 0.87
COL5A2P05997 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC20.51■□□□□ 0.87
COL5A2P05997 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC20.51■□□□□ 0.87
COL5A2P05997 AC134698.3-201ENST00000523880 214 ntBASIC20.51■□□□□ 0.87
COL5A2P05997 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC20.51■□□□□ 0.87
COL5A2P05997 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
COL5A2P05997 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC20.51■□□□□ 0.87
COL5A2P05997 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.51■□□□□ 0.87
COL5A2P05997 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COL5A2P05997 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL5A2P05997 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
COL5A2P05997 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL5A2P05997 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
COL5A2P05997 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL5A2P05997 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
COL5A2P05997 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.51■□□□□ 0.87
COL5A2P05997 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL5A2P05997 AL391280.1-201ENST00000506969 1062 ntBASIC20.5■□□□□ 0.87
COL5A2P05997 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms