Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
IDH3BO43837 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.76□□□□□ -0.05
IDH3BO43837 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.76□□□□□ -0.05
IDH3BO43837 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
IDH3BO43837 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.76□□□□□ -0.05
IDH3BO43837 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.76□□□□□ -0.05
IDH3BO43837 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IDH3BO43837 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IDH3BO43837 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
IDH3BO43837 AP005117.1-202ENST00000581724 1908 ntBASIC14.76□□□□□ -0.05
IDH3BO43837 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.76□□□□□ -0.05
IDH3BO43837 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IDH3BO43837 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.76□□□□□ -0.05
IDH3BO43837 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IDH3BO43837 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IDH3BO43837 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.75□□□□□ -0.05
IDH3BO43837 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IDH3BO43837 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
IDH3BO43837 AC023157.3-201ENST00000619086 2088 ntBASIC14.75□□□□□ -0.05
IDH3BO43837 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
IDH3BO43837 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IDH3BO43837 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
IDH3BO43837 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
IDH3BO43837 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.75□□□□□ -0.05
IDH3BO43837 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.75□□□□□ -0.05
IDH3BO43837 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
IDH3BO43837 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.75□□□□□ -0.05
IDH3BO43837 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IDH3BO43837 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IDH3BO43837 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
IDH3BO43837 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.75□□□□□ -0.05
IDH3BO43837 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.75□□□□□ -0.05
IDH3BO43837 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
IDH3BO43837 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.75□□□□□ -0.05
IDH3BO43837 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
IDH3BO43837 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
IDH3BO43837 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.75□□□□□ -0.05
IDH3BO43837 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.75□□□□□ -0.05
IDH3BO43837 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
IDH3BO43837 HNRNPDP1-201ENST00000439535 754 ntBASIC14.75□□□□□ -0.05
IDH3BO43837 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
IDH3BO43837 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.75□□□□□ -0.05
IDH3BO43837 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.75□□□□□ -0.05
IDH3BO43837 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IDH3BO43837 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.75□□□□□ -0.05
IDH3BO43837 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.75□□□□□ -0.05
IDH3BO43837 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.75□□□□□ -0.05
IDH3BO43837 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.75□□□□□ -0.05
IDH3BO43837 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.75□□□□□ -0.05
IDH3BO43837 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.75□□□□□ -0.05
IDH3BO43837 AC010491.1-201ENST00000563101 2797 ntBASIC14.75□□□□□ -0.05
IDH3BO43837 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.75□□□□□ -0.05
IDH3BO43837 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
IDH3BO43837 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
IDH3BO43837 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
IDH3BO43837 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.75□□□□□ -0.05
IDH3BO43837 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
IDH3BO43837 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.75□□□□□ -0.05
IDH3BO43837 AP002414.3-201ENST00000589352 1468 ntBASIC14.75□□□□□ -0.05
IDH3BO43837 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IDH3BO43837 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.75□□□□□ -0.05
IDH3BO43837 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
IDH3BO43837 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.75□□□□□ -0.05
IDH3BO43837 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.75□□□□□ -0.05
IDH3BO43837 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
IDH3BO43837 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
IDH3BO43837 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
IDH3BO43837 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.74□□□□□ -0.05
IDH3BO43837 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.74□□□□□ -0.05
IDH3BO43837 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
IDH3BO43837 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.74□□□□□ -0.05
IDH3BO43837 HMGA1P7-201ENST00000406908 502 ntBASIC14.74□□□□□ -0.05
IDH3BO43837 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.74□□□□□ -0.05
IDH3BO43837 AL031055.1-201ENST00000606362 631 ntBASIC14.74□□□□□ -0.05
IDH3BO43837 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.74□□□□□ -0.05
IDH3BO43837 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.74□□□□□ -0.05
IDH3BO43837 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
IDH3BO43837 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
IDH3BO43837 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.74□□□□□ -0.05
IDH3BO43837 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.74□□□□□ -0.05
IDH3BO43837 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IDH3BO43837 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms