Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.77■□□□□ 0.28
TNRC18O15417 AC239868.1-201ENST00000369385 493 ntBASIC16.77■□□□□ 0.28
TNRC18O15417 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNRC18O15417 OLA1P2-201ENST00000395519 1264 ntBASIC16.77■□□□□ 0.28
TNRC18O15417 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.77■□□□□ 0.28
TNRC18O15417 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.77■□□□□ 0.28
TNRC18O15417 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.77■□□□□ 0.28
TNRC18O15417 FAM86B3P-203ENST00000523992 854 ntBASIC16.77■□□□□ 0.28
TNRC18O15417 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.77■□□□□ 0.28
TNRC18O15417 AL590235.1-201ENST00000564650 861 ntBASIC16.77■□□□□ 0.28
TNRC18O15417 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC16.77■□□□□ 0.28
TNRC18O15417 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNRC18O15417 AC254633.1-201ENST00000606790 345 ntBASIC16.77■□□□□ 0.28
TNRC18O15417 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.77■□□□□ 0.28
TNRC18O15417 MIR6893-201ENST00000613458 69 ntBASIC16.77■□□□□ 0.28
TNRC18O15417 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNRC18O15417 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TNRC18O15417 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.77■□□□□ 0.27
TNRC18O15417 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TNRC18O15417 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TNRC18O15417 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNRC18O15417 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.77■□□□□ 0.27
TNRC18O15417 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNRC18O15417 AL450487.2-201ENST00000615934 407 ntBASIC16.77■□□□□ 0.27
TNRC18O15417 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.77■□□□□ 0.27
TNRC18O15417 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TNRC18O15417 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TNRC18O15417 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TNRC18O15417 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.76■□□□□ 0.27
TNRC18O15417 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNRC18O15417 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNRC18O15417 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNRC18O15417 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNRC18O15417 AC026320.2-201ENST00000434379 478 ntBASIC16.76■□□□□ 0.27
TNRC18O15417 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.76■□□□□ 0.27
TNRC18O15417 AP000911.2-201ENST00000534330 502 ntBASIC16.76■□□□□ 0.27
TNRC18O15417 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.76■□□□□ 0.27
TNRC18O15417 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.76■□□□□ 0.27
TNRC18O15417 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.76■□□□□ 0.27
TNRC18O15417 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TNRC18O15417 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TNRC18O15417 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNRC18O15417 AL645728.1-201ENST00000366221 2101 ntBASIC16.76■□□□□ 0.27
TNRC18O15417 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNRC18O15417 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TNRC18O15417 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNRC18O15417 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TNRC18O15417 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNRC18O15417 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNRC18O15417 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNRC18O15417 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.76■□□□□ 0.27
TNRC18O15417 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TNRC18O15417 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.76■□□□□ 0.27
TNRC18O15417 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TNRC18O15417 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC16.76■□□□□ 0.27
TNRC18O15417 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.76■□□□□ 0.27
TNRC18O15417 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.76■□□□□ 0.27
TNRC18O15417 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNRC18O15417 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TNRC18O15417 AC092299.1-201ENST00000632679 757 ntBASIC16.76■□□□□ 0.27
TNRC18O15417 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNRC18O15417 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.76■□□□□ 0.27
TNRC18O15417 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNRC18O15417 AC136759.1-202ENST00000530858 2194 ntBASIC16.75■□□□□ 0.27
TNRC18O15417 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.75■□□□□ 0.27
TNRC18O15417 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.75■□□□□ 0.27
TNRC18O15417 AL583805.1-201ENST00000391389 531 ntBASIC16.75■□□□□ 0.27
TNRC18O15417 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.75■□□□□ 0.27
TNRC18O15417 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNRC18O15417 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.75■□□□□ 0.27
TNRC18O15417 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.75■□□□□ 0.27
TNRC18O15417 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TNRC18O15417 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TNRC18O15417 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TNRC18O15417 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNRC18O15417 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNRC18O15417 AL354861.1-201ENST00000445213 355 ntBASIC16.75■□□□□ 0.27
TNRC18O15417 TREHP1-201ENST00000531328 465 ntBASIC16.75■□□□□ 0.27
TNRC18O15417 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNRC18O15417 AL358472.3-201ENST00000608147 415 ntBASIC16.75■□□□□ 0.27
TNRC18O15417 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
TNRC18O15417 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNRC18O15417 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNRC18O15417 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.75■□□□□ 0.27
TNRC18O15417 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNRC18O15417 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNRC18O15417 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNRC18O15417 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNRC18O15417 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC16.74■□□□□ 0.27
TNRC18O15417 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC16.74■□□□□ 0.27
TNRC18O15417 CHCHD2P9-201ENST00000461726 456 ntBASIC16.74■□□□□ 0.27
TNRC18O15417 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.74■□□□□ 0.27
TNRC18O15417 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.74■□□□□ 0.27
TNRC18O15417 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.74■□□□□ 0.27
TNRC18O15417 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNRC18O15417 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms