Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 GPX1P2-201ENST00000429271 606 ntBASIC14.31□□□□□ -0.12
TVP23AA6NH52 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 PDPK2P-202ENST00000562415 1191 ntBASIC14.31□□□□□ -0.12
TVP23AA6NH52 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 AC020658.6-201ENST00000623564 1870 ntBASIC14.31□□□□□ -0.12
TVP23AA6NH52 AC011477.6-201ENST00000604980 1927 ntBASIC14.31□□□□□ -0.12
TVP23AA6NH52 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TVP23AA6NH52 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TVP23AA6NH52 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 AC092127.1-201ENST00000567093 3455 ntBASIC14.3□□□□□ -0.12
TVP23AA6NH52 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 AC002056.1-201ENST00000395613 760 ntBASIC14.3□□□□□ -0.12
TVP23AA6NH52 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 AL590627.1-203ENST00000421194 1026 ntBASIC14.3□□□□□ -0.12
TVP23AA6NH52 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 SLC25A1P1-201ENST00000528351 927 ntBASIC14.3□□□□□ -0.12
TVP23AA6NH52 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 AC099522.2-201ENST00000607001 744 ntBASIC14.3□□□□□ -0.12
TVP23AA6NH52 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TVP23AA6NH52 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
TVP23AA6NH52 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TVP23AA6NH52 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TVP23AA6NH52 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.29□□□□□ -0.12
TVP23AA6NH52 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TVP23AA6NH52 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TVP23AA6NH52 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
TVP23AA6NH52 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TVP23AA6NH52 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms