Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 AC009407.1-201ENST00000568958 598 ntBASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 SPDYE22P-201ENST00000582158 798 ntBASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 AC008738.7-201ENST00000609744 511 ntBASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 MIR6069-201ENST00000620069 79 ntBASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TSSC4Q9Y5U2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 KRT8P12-202ENST00000472924 1397 ntBASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 AL353779.1-201ENST00000434793 351 ntBASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 AC244107.1-201ENST00000442033 332 ntBASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 AC025048.6-201ENST00000634326 1161 ntBASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.56□□□□□ -0.4
TSSC4Q9Y5U2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TSSC4Q9Y5U2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TSSC4Q9Y5U2 AC005915.1-201ENST00000624912 2018 ntBASIC12.55□□□□□ -0.4
TSSC4Q9Y5U2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TSSC4Q9Y5U2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TSSC4Q9Y5U2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
TSSC4Q9Y5U2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TSSC4Q9Y5U2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TSSC4Q9Y5U2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TSSC4Q9Y5U2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms