Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.33■□□□□ 0.36
HIPK3Q9H422 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK3Q9H422 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.33■□□□□ 0.36
HIPK3Q9H422 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK3Q9H422 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HIPK3Q9H422 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.33■□□□□ 0.36
HIPK3Q9H422 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HIPK3Q9H422 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.33■□□□□ 0.36
HIPK3Q9H422 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK3Q9H422 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK3Q9H422 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK3Q9H422 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HIPK3Q9H422 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
HIPK3Q9H422 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
HIPK3Q9H422 AC011270.2-201ENST00000624293 2550 ntBASIC17.33■□□□□ 0.36
HIPK3Q9H422 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 AC005915.1-201ENST00000624912 2018 ntBASIC17.32■□□□□ 0.36
HIPK3Q9H422 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 ACKR1-201ENST00000368121 1240 ntBASIC17.32■□□□□ 0.36
HIPK3Q9H422 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 CNN2P8-201ENST00000421872 913 ntBASIC17.32■□□□□ 0.36
HIPK3Q9H422 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 PHKG1P2-201ENST00000457537 863 ntBASIC17.32■□□□□ 0.36
HIPK3Q9H422 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HIPK3Q9H422 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK3Q9H422 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 AC000095.1-201ENST00000603208 874 ntBASIC17.31■□□□□ 0.36
HIPK3Q9H422 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 AD000864.1-201ENST00000624076 2295 ntBASIC17.31■□□□□ 0.36
HIPK3Q9H422 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 HLA-A-202ENST00000376806 1854 ntBASIC17.31■□□□□ 0.36
HIPK3Q9H422 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HIPK3Q9H422 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HIPK3Q9H422 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms