Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC68Q9H2F9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 ACTG1P14-201ENST00000446382 1122 ntBASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 IGHV3-62-201ENST00000520057 340 ntBASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 MTDHP5-201ENST00000598980 586 ntBASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC68Q9H2F9 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC68Q9H2F9 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC68Q9H2F9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC68Q9H2F9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
CCDC68Q9H2F9 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.08■□□□□ 0.17
CCDC68Q9H2F9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.08■□□□□ 0.17
CCDC68Q9H2F9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
CCDC68Q9H2F9 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC68Q9H2F9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC68Q9H2F9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC68Q9H2F9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.08■□□□□ 0.17
CCDC68Q9H2F9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.08■□□□□ 0.17
CCDC68Q9H2F9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 AC004832.2-201ENST00000426397 482 ntBASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 AL138918.1-201ENST00000568306 659 ntBASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 AC026120.1-201ENST00000611536 926 ntBASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 C20orf181-201ENST00000623918 480 ntBASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 AC092902.6-201ENST00000641783 218 ntBASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
CCDC68Q9H2F9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms