Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 MIR6752-201ENST00000618442 71 ntBASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 AC105917.1-201ENST00000506637 2539 ntBASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHKBP1Q8TBC3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 AL691432.1-201ENST00000596308 1422 ntBASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 AC079776.1-201ENST00000401540 1152 ntBASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 TIMM17BP1-201ENST00000545713 516 ntBASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 CYP2T1P-202ENST00000641596 2535 ntBASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 AL592424.1-201ENST00000563624 1536 ntBASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 AC023824.1-201ENST00000562945 2975 ntBASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHKBP1Q8TBC3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 AL162274.1-201ENST00000617191 1098 ntBASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.73■□□□□ 0.27
SHKBP1Q8TBC3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms