Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 AC022144.1-201ENST00000602255 1580 ntBASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 MTHFR-217ENST00000641820 1569 ntBASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 AC093724.1-201ENST00000448659 1027 ntBASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 AF228730.6-201ENST00000641497 218 ntBASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 AC084121.3-201ENST00000641716 218 ntBASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 AC105233.6-201ENST00000642093 218 ntBASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 GPAA1P2-202ENST00000606848 1787 ntBASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLDND2Q8NHS1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 SERBP1P5-201ENST00000510079 1181 ntBASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 AC239800.4-201ENST00000603712 296 ntBASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 AL031731.1-201ENST00000642131 2094 ntBASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDND2Q8NHS1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms