Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 ALOX12P2-203ENST00000570921 1945 ntBASIC19.78■□□□□ 0.76
RC3H1Q5TC82 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RC3H1Q5TC82 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 EIF4HP1-201ENST00000453115 687 ntBASIC19.77■□□□□ 0.76
RC3H1Q5TC82 UPF3AP2-201ENST00000457924 1132 ntBASIC19.77■□□□□ 0.76
RC3H1Q5TC82 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 CHMP4BP1-201ENST00000556017 588 ntBASIC19.77■□□□□ 0.76
RC3H1Q5TC82 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RC3H1Q5TC82 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
RC3H1Q5TC82 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RC3H1Q5TC82 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
RC3H1Q5TC82 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
RC3H1Q5TC82 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RC3H1Q5TC82 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 TPM3P8-201ENST00000330554 643 ntBASIC19.76■□□□□ 0.75
RC3H1Q5TC82 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 MIR4313-201ENST00000580760 101 ntBASIC19.76■□□□□ 0.75
RC3H1Q5TC82 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 AL451050.2-201ENST00000606967 682 ntBASIC19.76■□□□□ 0.75
RC3H1Q5TC82 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 AC138627.1-207ENST00000641560 1006 ntBASIC19.76■□□□□ 0.75
RC3H1Q5TC82 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RC3H1Q5TC82 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.76■□□□□ 0.75
RC3H1Q5TC82 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 KRT8P19-201ENST00000551916 1455 ntBASIC19.75■□□□□ 0.75
RC3H1Q5TC82 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 RN7SL769P-201ENST00000469386 295 ntBASIC19.75■□□□□ 0.75
RC3H1Q5TC82 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 AL023775.1-201ENST00000454907 1746 ntBASIC19.75■□□□□ 0.75
RC3H1Q5TC82 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 AL354989.2-201ENST00000435838 1540 ntBASIC19.75■□□□□ 0.75
RC3H1Q5TC82 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.75■□□□□ 0.75
RC3H1Q5TC82 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms