Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B3Q16720 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B3Q16720 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP2B3Q16720 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ATP2B3Q16720 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B3Q16720 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ATP2B3Q16720 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP2B3Q16720 PHKG1P2-201ENST00000457537 863 ntBASIC19.54■□□□□ 0.72
ATP2B3Q16720 RN7SL692P-201ENST00000464677 288 ntBASIC19.54■□□□□ 0.72
ATP2B3Q16720 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B3Q16720 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP2B3Q16720 AC055876.2-201ENST00000531834 546 ntBASIC19.54■□□□□ 0.72
ATP2B3Q16720 TIMM17BP1-201ENST00000545713 516 ntBASIC19.54■□□□□ 0.72
ATP2B3Q16720 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP2B3Q16720 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP2B3Q16720 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP2B3Q16720 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
ATP2B3Q16720 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B3Q16720 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B3Q16720 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B3Q16720 AL391825.1-201ENST00000457671 1364 ntBASIC19.54■□□□□ 0.72
ATP2B3Q16720 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP2B3Q16720 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B3Q16720 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP2B3Q16720 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP2B3Q16720 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ATP2B3Q16720 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP2B3Q16720 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP2B3Q16720 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP2B3Q16720 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.53■□□□□ 0.72
ATP2B3Q16720 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP2B3Q16720 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ATP2B3Q16720 AL596325.1-201ENST00000563991 1082 ntBASIC19.53■□□□□ 0.72
ATP2B3Q16720 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP2B3Q16720 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.53■□□□□ 0.72
ATP2B3Q16720 AL450472.2-201ENST00000603663 1156 ntBASIC19.53■□□□□ 0.72
ATP2B3Q16720 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ATP2B3Q16720 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.53■□□□□ 0.72
ATP2B3Q16720 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 AC006449.5-201ENST00000610658 2098 ntBASIC19.53■□□□□ 0.72
ATP2B3Q16720 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ATP2B3Q16720 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ATP2B3Q16720 AC132872.4-202ENST00000622924 2756 ntBASIC19.53■□□□□ 0.72
ATP2B3Q16720 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
ATP2B3Q16720 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP2B3Q16720 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP2B3Q16720 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2B3Q16720 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2B3Q16720 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2B3Q16720 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.52■□□□□ 0.72
ATP2B3Q16720 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
ATP2B3Q16720 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2B3Q16720 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2B3Q16720 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2B3Q16720 AC023824.1-201ENST00000562945 2975 ntBASIC19.52■□□□□ 0.72
ATP2B3Q16720 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2B3Q16720 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2B3Q16720 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2B3Q16720 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2B3Q16720 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP2B3Q16720 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2B3Q16720 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ATP2B3Q16720 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2B3Q16720 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2B3Q16720 AC087499.6-201ENST00000411576 835 ntBASIC19.52■□□□□ 0.72
ATP2B3Q16720 AC005034.1-201ENST00000426657 489 ntBASIC19.52■□□□□ 0.72
ATP2B3Q16720 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.52■□□□□ 0.72
ATP2B3Q16720 RPL13P2-201ENST00000440687 659 ntBASIC19.52■□□□□ 0.72
ATP2B3Q16720 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP2B3Q16720 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.52■□□□□ 0.72
ATP2B3Q16720 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP2B3Q16720 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.52■□□□□ 0.72
ATP2B3Q16720 HNRNPUP1-201ENST00000554987 333 ntBASIC19.52■□□□□ 0.72
ATP2B3Q16720 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.52■□□□□ 0.72
ATP2B3Q16720 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ATP2B3Q16720 AL035252.4-201ENST00000624174 288 ntBASIC19.52■□□□□ 0.72
ATP2B3Q16720 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP2B3Q16720 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2B3Q16720 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP2B3Q16720 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP2B3Q16720 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP2B3Q16720 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.52■□□□□ 0.71
ATP2B3Q16720 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms