Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP1P78357 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP1P78357 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP1P78357 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 PRKXP1-201ENST00000561423 1122 ntBASIC18.75■□□□□ 0.59
CNTNAP1P78357 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 MIR3907-201ENST00000579424 151 ntBASIC18.75■□□□□ 0.59
CNTNAP1P78357 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP1P78357 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 AC079336.7-201ENST00000623428 1078 ntBASIC18.75■□□□□ 0.59
CNTNAP1P78357 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP1P78357 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP1P78357 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP1P78357 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP1P78357 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNTNAP1P78357 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.75■□□□□ 0.59
CNTNAP1P78357 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP1P78357 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP1P78357 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP1P78357 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP1P78357 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CNTNAP1P78357 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CNTNAP1P78357 AC005332.8-201ENST00000622750 2735 ntBASIC18.74■□□□□ 0.59
CNTNAP1P78357 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CNTNAP1P78357 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP1P78357 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP1P78357 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.74■□□□□ 0.59
CNTNAP1P78357 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.74■□□□□ 0.59
CNTNAP1P78357 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.74■□□□□ 0.59
CNTNAP1P78357 HOMER2P2-201ENST00000451621 847 ntBASIC18.74■□□□□ 0.59
CNTNAP1P78357 AC134698.3-201ENST00000523880 214 ntBASIC18.74■□□□□ 0.59
CNTNAP1P78357 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP1P78357 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.74■□□□□ 0.59
CNTNAP1P78357 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CNTNAP1P78357 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.74■□□□□ 0.59
CNTNAP1P78357 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP1P78357 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP1P78357 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.74■□□□□ 0.59
CNTNAP1P78357 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CNTNAP1P78357 AC106886.4-201ENST00000623557 2502 ntBASIC18.74■□□□□ 0.59
CNTNAP1P78357 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CNTNAP1P78357 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.74■□□□□ 0.59
CNTNAP1P78357 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CNTNAP1P78357 AC015818.8-201ENST00000587907 1519 ntBASIC18.74■□□□□ 0.59
CNTNAP1P78357 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.74■□□□□ 0.59
CNTNAP1P78357 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP1P78357 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP1P78357 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP1P78357 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNTNAP1P78357 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
CNTNAP1P78357 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CNTNAP1P78357 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 MIR769-201ENST00000390225 118 ntBASIC18.73■□□□□ 0.59
CNTNAP1P78357 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.73■□□□□ 0.59
CNTNAP1P78357 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.73■□□□□ 0.59
CNTNAP1P78357 AC069218.1-201ENST00000435269 762 ntBASIC18.73■□□□□ 0.59
CNTNAP1P78357 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.73■□□□□ 0.59
CNTNAP1P78357 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.73■□□□□ 0.59
CNTNAP1P78357 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.73■□□□□ 0.59
CNTNAP1P78357 FGFR3P5-201ENST00000564496 886 ntBASIC18.73■□□□□ 0.59
CNTNAP1P78357 AC025279.2-201ENST00000569730 653 ntBASIC18.73■□□□□ 0.59
CNTNAP1P78357 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.73■□□□□ 0.59
CNTNAP1P78357 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
CNTNAP1P78357 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.73■□□□□ 0.59
CNTNAP1P78357 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.73■□□□□ 0.59
CNTNAP1P78357 AL121723.1-201ENST00000445194 1519 ntBASIC18.73■□□□□ 0.59
CNTNAP1P78357 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CNTNAP1P78357 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.73■□□□□ 0.59
CNTNAP1P78357 AC006480.2-201ENST00000609770 1337 ntBASIC18.73■□□□□ 0.59
CNTNAP1P78357 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNTNAP1P78357 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CNTNAP1P78357 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CNTNAP1P78357 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms