Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.84■□□□□ 0.45
TM4SF4P48230 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.84■□□□□ 0.45
TM4SF4P48230 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.84■□□□□ 0.45
TM4SF4P48230 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.84■□□□□ 0.45
TM4SF4P48230 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.84■□□□□ 0.45
TM4SF4P48230 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
TM4SF4P48230 AC021723.1-201ENST00000486306 515 ntBASIC17.84■□□□□ 0.45
TM4SF4P48230 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.84■□□□□ 0.45
TM4SF4P48230 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.84■□□□□ 0.45
TM4SF4P48230 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.84■□□□□ 0.45
TM4SF4P48230 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.84■□□□□ 0.45
TM4SF4P48230 COX6A1P2-201ENST00000620597 330 ntBASIC17.84■□□□□ 0.45
TM4SF4P48230 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.84■□□□□ 0.45
TM4SF4P48230 BCL2-203ENST00000589955 5011 ntBASIC17.84■□□□□ 0.45
TM4SF4P48230 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.84■□□□□ 0.45
TM4SF4P48230 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.84■□□□□ 0.45
TM4SF4P48230 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF4P48230 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
TM4SF4P48230 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
TM4SF4P48230 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM4SF4P48230 LRRC59-203ENST00000576448 1531 ntBASIC17.83■□□□□ 0.45
TM4SF4P48230 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TM4SF4P48230 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TM4SF4P48230 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.83■□□□□ 0.45
TM4SF4P48230 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM4SF4P48230 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF4P48230 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF4P48230 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.83■□□□□ 0.44
TM4SF4P48230 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TM4SF4P48230 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF4P48230 HIST2H2BB-201ENST00000449108 381 ntBASIC17.83■□□□□ 0.44
TM4SF4P48230 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.83■□□□□ 0.44
TM4SF4P48230 NPM1P43-201ENST00000558669 786 ntBASIC17.83■□□□□ 0.44
TM4SF4P48230 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.83■□□□□ 0.44
TM4SF4P48230 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.83■□□□□ 0.44
TM4SF4P48230 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.83■□□□□ 0.44
TM4SF4P48230 AC103691.2-201ENST00000618824 433 ntBASIC17.83■□□□□ 0.44
TM4SF4P48230 AC004923.1-202ENST00000642106 209 ntBASIC17.83■□□□□ 0.44
TM4SF4P48230 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TM4SF4P48230 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF4P48230 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
TM4SF4P48230 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF4P48230 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF4P48230 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
TM4SF4P48230 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
TM4SF4P48230 KRT8P4-201ENST00000509735 1454 ntBASIC17.82■□□□□ 0.44
TM4SF4P48230 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF4P48230 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF4P48230 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF4P48230 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF4P48230 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF4P48230 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.82■□□□□ 0.44
TM4SF4P48230 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.82■□□□□ 0.44
TM4SF4P48230 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF4P48230 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.82■□□□□ 0.44
TM4SF4P48230 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.82■□□□□ 0.44
TM4SF4P48230 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.82■□□□□ 0.44
TM4SF4P48230 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.82■□□□□ 0.44
TM4SF4P48230 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.82■□□□□ 0.44
TM4SF4P48230 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.82■□□□□ 0.44
TM4SF4P48230 AC019193.1-201ENST00000506678 823 ntBASIC17.82■□□□□ 0.44
TM4SF4P48230 AC106794.1-201ENST00000506935 792 ntBASIC17.82■□□□□ 0.44
TM4SF4P48230 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.82■□□□□ 0.44
TM4SF4P48230 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.82■□□□□ 0.44
TM4SF4P48230 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.82■□□□□ 0.44
TM4SF4P48230 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.82■□□□□ 0.44
TM4SF4P48230 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.82■□□□□ 0.44
TM4SF4P48230 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.82■□□□□ 0.44
TM4SF4P48230 RN7SL163P-201ENST00000583100 276 ntBASIC17.82■□□□□ 0.44
TM4SF4P48230 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.82■□□□□ 0.44
TM4SF4P48230 OR10B1P-201ENST00000601666 907 ntBASIC17.82■□□□□ 0.44
TM4SF4P48230 AC141586.5-201ENST00000624546 2050 ntBASIC17.82■□□□□ 0.44
TM4SF4P48230 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF4P48230 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.82■□□□□ 0.44
TM4SF4P48230 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.82■□□□□ 0.44
TM4SF4P48230 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF4P48230 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF4P48230 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF4P48230 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF4P48230 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF4P48230 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF4P48230 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF4P48230 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TM4SF4P48230 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TM4SF4P48230 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.81■□□□□ 0.44
TM4SF4P48230 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF4P48230 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF4P48230 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF4P48230 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms