Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.88■□□□□ 0.29
CHRNA3P32297 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.88■□□□□ 0.29
CHRNA3P32297 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHRNA3P32297 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CHRNA3P32297 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CHRNA3P32297 AC011477.6-201ENST00000604980 1927 ntBASIC16.88■□□□□ 0.29
CHRNA3P32297 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.88■□□□□ 0.29
CHRNA3P32297 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHRNA3P32297 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.88■□□□□ 0.29
CHRNA3P32297 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHRNA3P32297 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CHRNA3P32297 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.87■□□□□ 0.29
CHRNA3P32297 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CHRNA3P32297 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.87■□□□□ 0.29
CHRNA3P32297 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CHRNA3P32297 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CHRNA3P32297 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.87■□□□□ 0.29
CHRNA3P32297 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.87■□□□□ 0.29
CHRNA3P32297 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.87■□□□□ 0.29
CHRNA3P32297 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.87■□□□□ 0.29
CHRNA3P32297 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.87■□□□□ 0.29
CHRNA3P32297 TSEN15P1-201ENST00000423257 515 ntBASIC16.87■□□□□ 0.29
CHRNA3P32297 AC005237.2-201ENST00000434368 219 ntBASIC16.87■□□□□ 0.29
CHRNA3P32297 AC245100.5-201ENST00000452108 331 ntBASIC16.87■□□□□ 0.29
CHRNA3P32297 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.87■□□□□ 0.29
CHRNA3P32297 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.87■□□□□ 0.29
CHRNA3P32297 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.87■□□□□ 0.29
CHRNA3P32297 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.87■□□□□ 0.29
CHRNA3P32297 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CHRNA3P32297 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.87■□□□□ 0.29
CHRNA3P32297 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHRNA3P32297 NORAD-201ENST00000565493 5339 ntBASIC16.87■□□□□ 0.29
CHRNA3P32297 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CHRNA3P32297 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA3P32297 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CHRNA3P32297 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA3P32297 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CHRNA3P32297 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHRNA3P32297 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CHRNA3P32297 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA3P32297 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.86■□□□□ 0.29
CHRNA3P32297 AC063926.3-201ENST00000624734 5658 ntBASIC16.86■□□□□ 0.29
CHRNA3P32297 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHRNA3P32297 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 AL627223.1-201ENST00000416693 442 ntBASIC16.86■□□□□ 0.29
CHRNA3P32297 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.86■□□□□ 0.29
CHRNA3P32297 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.86■□□□□ 0.29
CHRNA3P32297 AC093724.1-201ENST00000448659 1027 ntBASIC16.86■□□□□ 0.29
CHRNA3P32297 AC023141.5-201ENST00000458585 616 ntBASIC16.86■□□□□ 0.29
CHRNA3P32297 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.86■□□□□ 0.29
CHRNA3P32297 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.86■□□□□ 0.29
CHRNA3P32297 AL109954.1-202ENST00000564051 2148 ntBASIC16.86■□□□□ 0.29
CHRNA3P32297 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.86■□□□□ 0.29
CHRNA3P32297 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.86■□□□□ 0.29
CHRNA3P32297 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CHRNA3P32297 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.86■□□□□ 0.29
CHRNA3P32297 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CHRNA3P32297 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHRNA3P32297 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CHRNA3P32297 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHRNA3P32297 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.86■□□□□ 0.29
CHRNA3P32297 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA3P32297 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms