Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CD40P25942 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.74□□□□□ -0.21
CD40P25942 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.74□□□□□ -0.21
CD40P25942 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 AC098614.1-201ENST00000368528 745 ntBASIC13.74□□□□□ -0.21
CD40P25942 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CD40P25942 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.74□□□□□ -0.21
CD40P25942 NME2P1-201ENST00000426182 414 ntBASIC13.74□□□□□ -0.21
CD40P25942 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.74□□□□□ -0.21
CD40P25942 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.74□□□□□ -0.21
CD40P25942 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.74□□□□□ -0.21
CD40P25942 TARDBPP1-201ENST00000442013 1203 ntBASIC13.74□□□□□ -0.21
CD40P25942 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.74□□□□□ -0.21
CD40P25942 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.74□□□□□ -0.21
CD40P25942 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.74□□□□□ -0.21
CD40P25942 CR383656.12-201ENST00000549567 513 ntBASIC13.74□□□□□ -0.21
CD40P25942 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.74□□□□□ -0.21
CD40P25942 AC008494.3-201ENST00000606615 944 ntBASIC13.74□□□□□ -0.21
CD40P25942 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 AC007431.3-201ENST00000623221 587 ntBASIC13.74□□□□□ -0.21
CD40P25942 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CD40P25942 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CD40P25942 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.74□□□□□ -0.21
CD40P25942 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CD40P25942 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.74□□□□□ -0.21
CD40P25942 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.74□□□□□ -0.21
CD40P25942 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CD40P25942 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD40P25942 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40P25942 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.73□□□□□ -0.21
CD40P25942 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40P25942 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.73□□□□□ -0.21
CD40P25942 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40P25942 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.73□□□□□ -0.21
CD40P25942 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40P25942 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40P25942 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40P25942 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.73□□□□□ -0.21
CD40P25942 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CD40P25942 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.73□□□□□ -0.21
CD40P25942 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.73□□□□□ -0.21
CD40P25942 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40P25942 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.73□□□□□ -0.21
CD40P25942 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.73□□□□□ -0.21
CD40P25942 RPL13P2-201ENST00000440687 659 ntBASIC13.73□□□□□ -0.21
CD40P25942 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.73□□□□□ -0.21
CD40P25942 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40P25942 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40P25942 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CD40P25942 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.73□□□□□ -0.21
CD40P25942 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40P25942 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 RRP7BP-205ENST00000566851 833 ntBASIC13.73□□□□□ -0.21
CD40P25942 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CD40P25942 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.73□□□□□ -0.21
CD40P25942 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.73□□□□□ -0.21
CD40P25942 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40P25942 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.73□□□□□ -0.21
CD40P25942 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CD40P25942 CU639417.3-201ENST00000624240 1404 ntBASIC13.73□□□□□ -0.21
CD40P25942 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD40P25942 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms